Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2725 |
Symbol | |
ID | 1221572 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 2931432 |
End bp | 2931905 |
Gene Length | 474 bp |
Protein Length | 157 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637239126 |
Product | putative transcription regulator protein |
Protein accession | NP_520846 |
Protein GI | 17547444 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.612085 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCGGCAG TCATCGACGA TCCGGTGTAC GCGGGCCTGA CCGGGGCGCT GCGCGACTTC TACATTCGGT CGCAGCATGT GCTCGATACG TTGCTGGCGG AGAAGGGCAT CTCCTGGGCG CGCATGAAGC TGATCTATTT CATCCGGCAC GAGGGCAGCG TACGTTCGGT CGACCTGATG CGGGCCTTCG GCCATGCGCC GAGAACCGTC ACCGAGGCGG TGGATGCGCT GGAGCGCGAT GGCCTGGTCG AGCGCGTGCC CGATCCGGTC GACCGCCGCG CGAAGAACAT CTCGCTCACG CGCGCCGGCG AAGCGCTGTA CCAGTCGGCC GAACCGATCC GACGGCGGCT GGGCGCCGAA ATCTGCGGCG TGCTGGATCC GGCCGAGCAG CGGGTGCTGC AGGACATGCT GACGCGCATG AGCCAGCGTC TGGCGATGAT CGAAGCGGCC GCGGAACGGG GCGCGCAGGG CTGA
|
Protein sequence | MSAVIDDPVY AGLTGALRDF YIRSQHVLDT LLAEKGISWA RMKLIYFIRH EGSVRSVDLM RAFGHAPRTV TEAVDALERD GLVERVPDPV DRRAKNISLT RAGEALYQSA EPIRRRLGAE ICGVLDPAEQ RVLQDMLTRM SQRLAMIEAA AERGAQG
|
| |