Gene RSc2718 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc2718 
Symbol 
ID1221565 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand- 
Start bp2924254 
End bp2924823 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content65% 
IMG OID637239119 
Productsignal peptide protein 
Protein accessionNP_520839 
Protein GI17547437 
COG category[S] Function unknown 
COG ID[COG2353] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.495901 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.071315 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAAAC GAGTTGCGCG TCCCCGCGCC CTTGGGCTGA TCGCCGCCGG CGCCTTGTCG 
ATCGCCGCGC TGTCGGCCAT CGCCCAGGTG GATGCCGCCA AGAGCAGCGT GACGGCCACC 
GGCAAGCAAC TGGGCGTGCC GATGGACATC AAGTTCGGCA AGTTCGATGC GGCCGTGAGC 
TACAACCCGG CCAACCTGGC GGCCTCCACG GCCAAGGTCG ACATCGATGT GTCCAGCGTC 
GACGTGGGCG ACAAGGCCTA CAACGACGAA CTGAAGAAGA AGGACTGGTT CGACGCCGCC 
AAGTATCCGA AGGCGACCTT CGTGTCGTCC GCGTTCAAGC CGGGTGCCGG CGGCAAGGTG 
GAAGTGGTCG GCAAGCTGAC CATCAAGGGC GTCACGCAGG ACGTGACCGC GCCCTTCACC 
GTCAAGCAGG ACGGCGCCAG CCAGGTGTTC GAGGGCGCGC TGCCGATCAA GCGCAATGCG 
TTCCACGTCG GCGATGGCGA GTGGAAGGAC ACGTCGGTGG TCGCCGACGA CGTGACCATC 
AAGTTCCGTG TCGTTCTCGC CAAGAAGTAA
 
Protein sequence
MMKRVARPRA LGLIAAGALS IAALSAIAQV DAAKSSVTAT GKQLGVPMDI KFGKFDAAVS 
YNPANLAAST AKVDIDVSSV DVGDKAYNDE LKKKDWFDAA KYPKATFVSS AFKPGAGGKV 
EVVGKLTIKG VTQDVTAPFT VKQDGASQVF EGALPIKRNA FHVGDGEWKD TSVVADDVTI 
KFRVVLAKK