Gene RSc2712 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc2712 
SymbolqueA 
ID1221559 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp2917802 
End bp2918890 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content70% 
IMG OID637239113 
ProductS-adenosylmethionine:tRNA ribosyltransferase-isomerase 
Protein accessionNP_520833 
Protein GI17547431 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0809] S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) 
TIGRFAM ID[TIGR00113] S-adenosylmethionine:tRNA ribosyltransferase-isomerase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.244029 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGCGC CGCCATTCAT GCTGACGCTG TCCGATTTCG ATTTCGATCT GCCGCCCGAG 
CTGATCGCGC AAACCGCCCT GCCCGACCGC ACCGCGAGCC GCCTGCTGGC CGCACGCCAC
GACGCGCAGG GCACGCATTT CGATGACCGC CAGTTCGCCG ACCTGGTCGA CTACCTGCGC
CCCGGCGACC TGCTGGTCTT CAACGACACC CGCGTGATCA AGGCGCGCTT CTTCGGCCAC
AAGGCCAGCG GCGGCAAGAT CGAAGTGCTG GTCGAGCGCC TGCTGGACGA GCACACGGTG
CTGGCGCAGA TCCGCTCCAG CAAGTCGCCG GTCGCGGGCA GTACGCTGCG CCTGGCCGAT
GCCTTCGATG TGACGGTCGG ACCGCGCCAC GAACCCTTCT TCACCCTGCG CTTCCCGCAG
CCGGCGCTGG AGTTGATCGA GCAGTACGGC CGCCTGCCGC TGCCGCCCTA TATCGAGCAC
ACGCCCGACA GCTTCGACGA GACGCGCTAC CAGACCGTCT ATGCGCGCAC GCCCGGCGCC
GTGGCCGCGC CCACGGCCGG CCTGCATTTC GACGACGCGC TGTTCGCCAG GCTCGATGCG
ATGGGCGTGC GGCGCGGCTT CCTGACGCTG CACGTGGGCG CCGGCACGTT TTCGCCGGTG
CGCGTGGAGA ACATCGCCGA GCACCGCATG CACAGCGAGT GGTATGCCAT CTCGCCGGAC
CTGGCCGAGG CCATCCGCGC CACGCGGGCG GTGGGCGGGC GCATCGTCGC CGTCGGCACC
ACGTCGATGC GCGCGCTGGA ATCGGCCGCG CAGCCGGACG GCACGCTGGC GGCCGGCTCG
GGCGAGACCG ACATCTTCAT CACCCCCGGC TACCGCTTCC GGCTGGTCGA CGCGCTGGTG
ACCAACTTCC ACCTGCCCAA GTCGACGCTG CTGATGCTGG TGTCGGCATT CGCGGGCCTG
GAGACCATCC GCGCCGCCTA CCGCCACGCC ATCGCGCAGC GCTACCGCTT CTTCAGCTAC
GGCGATGCCA TGTTCCTGAC GCGCGCCGAG CCTGATACCC AGTCCGCTTC CCCCGACCCC
TCATGCTGA
 
Protein sequence
MSAPPFMLTL SDFDFDLPPE LIAQTALPDR TASRLLAARH DAQGTHFDDR QFADLVDYLR 
PGDLLVFNDT RVIKARFFGH KASGGKIEVL VERLLDEHTV LAQIRSSKSP VAGSTLRLAD
AFDVTVGPRH EPFFTLRFPQ PALELIEQYG RLPLPPYIEH TPDSFDETRY QTVYARTPGA
VAAPTAGLHF DDALFARLDA MGVRRGFLTL HVGAGTFSPV RVENIAEHRM HSEWYAISPD
LAEAIRATRA VGGRIVAVGT TSMRALESAA QPDGTLAAGS GETDIFITPG YRFRLVDALV
TNFHLPKSTL LMLVSAFAGL ETIRAAYRHA IAQRYRFFSY GDAMFLTRAE PDTQSASPDP
SC