Gene RSc2709 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc2709 
Symbol 
ID1221556 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp2913187 
End bp2914317 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content70% 
IMG OID637239110 
Producthypothetical protein 
Protein accessionNP_520830 
Protein GI17547428 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3616] Predicted amino acid aldolase or racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0920937 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTTGC CATCCCTCAA TACCCCGGCC GCCTTGATCG ACGTCGCCCG CATGACCCGC 
AACATCGAGC GGATGCAGCA GCGCCTGGAC GCGCTCGGCG TCCGCTTCCG GCCCCACGTC
AAGACGACGA AGTGCGAGCC GGTCGTCCGT GCGCAGCTCG CCGCCGGCGC CCAGGGCATC
ACGGTCTCCA CGCTCAAGGA GGCCGAGCAG TTCTTCTCGG CGGGCATCTG CGACATCGTC
TACGCCGTCG GCATGGCGCC GGCCAGGCTG CCGCAAGCGC TGGCGCTGCG CCGCCGGGGA
TGCGACCTGA AGATCGTCGC CGACAGCGTG ACCTGCGCGC AGGCCATCGC CGCGTTCGGC
GGCGAGCACG GCGAAGCGTT CGACGTGTGG ATCGAAGTGG ACGTCGACGG GCACCGCTCC
GGCATCGCCC CCGACGACGA TCGGCTCATC ACGGTCGGCC GGGTGCTGGC CGAGGGCGGC
ATGCGTCTGG GCGGCGTGCT GGCGCATGCC GGCTCCAGCT ATGAGTACCA CGCACACGAC
GCCCTGGTCC GCATCGCCGA ACTGGAGCGG TCCGGCTGCG TCCGGGCCGC CGAGCGGCTG
CGCGCGGCGG GCTTGCCGTG CGAGACCGTG AGCATCGGCT CCACGCCGAC GGCGCTCAGC
GCCGAGCATC TCGAGGGCGT GACCGAAGTC CGGGCCGGCG TGTATGTGAT GTTCGATCTC
GTCATGCACA ACGTGGGCGT CTGCGCGCTG TCCGACATCG CCCTGAGCGT GCTGACCACG
GTGATCGGCC ACCAGGAAGA CAAGGGATGG GCCATCGTCG ACGCCGGCTG GATGGCGATG
AGCCGCGACC GCGGCACGCA GAAGCAGCCG CGCGACTTCG GCTACGGGCT GGTGTGCTCG
GAACACGGCG AGGTGCTGGG CGAGTACCTG ATGACGGGGG CGAACCAGGA GCACGGCATC
GTCACCCGGT CAGACGCGCC GGATCGCGAG ATCGCGCAAC GGTTTCCGGT CGGGACACGG
CTGCGGATCC TGCCCAACCA CGCCTGCGCG ACCGGCGCCC AGCATCCCGA ATACCAGGCG
CTGGCCGAGA ACGGCACCGT CCAGGCGTGG CCCCGGTTCT ACGGCTGGTG A
 
Protein sequence
MRLPSLNTPA ALIDVARMTR NIERMQQRLD ALGVRFRPHV KTTKCEPVVR AQLAAGAQGI 
TVSTLKEAEQ FFSAGICDIV YAVGMAPARL PQALALRRRG CDLKIVADSV TCAQAIAAFG
GEHGEAFDVW IEVDVDGHRS GIAPDDDRLI TVGRVLAEGG MRLGGVLAHA GSSYEYHAHD
ALVRIAELER SGCVRAAERL RAAGLPCETV SIGSTPTALS AEHLEGVTEV RAGVYVMFDL
VMHNVGVCAL SDIALSVLTT VIGHQEDKGW AIVDAGWMAM SRDRGTQKQP RDFGYGLVCS
EHGEVLGEYL MTGANQEHGI VTRSDAPDRE IAQRFPVGTR LRILPNHACA TGAQHPEYQA
LAENGTVQAW PRFYGW