Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2709 |
Symbol | |
ID | 1221556 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 2913187 |
End bp | 2914317 |
Gene Length | 1131 bp |
Protein Length | 376 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637239110 |
Product | hypothetical protein |
Protein accession | NP_520830 |
Protein GI | 17547428 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3616] Predicted amino acid aldolase or racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0920937 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCTTGC CATCCCTCAA TACCCCGGCC GCCTTGATCG ACGTCGCCCG CATGACCCGC AACATCGAGC GGATGCAGCA GCGCCTGGAC GCGCTCGGCG TCCGCTTCCG GCCCCACGTC AAGACGACGA AGTGCGAGCC GGTCGTCCGT GCGCAGCTCG CCGCCGGCGC CCAGGGCATC ACGGTCTCCA CGCTCAAGGA GGCCGAGCAG TTCTTCTCGG CGGGCATCTG CGACATCGTC TACGCCGTCG GCATGGCGCC GGCCAGGCTG CCGCAAGCGC TGGCGCTGCG CCGCCGGGGA TGCGACCTGA AGATCGTCGC CGACAGCGTG ACCTGCGCGC AGGCCATCGC CGCGTTCGGC GGCGAGCACG GCGAAGCGTT CGACGTGTGG ATCGAAGTGG ACGTCGACGG GCACCGCTCC GGCATCGCCC CCGACGACGA TCGGCTCATC ACGGTCGGCC GGGTGCTGGC CGAGGGCGGC ATGCGTCTGG GCGGCGTGCT GGCGCATGCC GGCTCCAGCT ATGAGTACCA CGCACACGAC GCCCTGGTCC GCATCGCCGA ACTGGAGCGG TCCGGCTGCG TCCGGGCCGC CGAGCGGCTG CGCGCGGCGG GCTTGCCGTG CGAGACCGTG AGCATCGGCT CCACGCCGAC GGCGCTCAGC GCCGAGCATC TCGAGGGCGT GACCGAAGTC CGGGCCGGCG TGTATGTGAT GTTCGATCTC GTCATGCACA ACGTGGGCGT CTGCGCGCTG TCCGACATCG CCCTGAGCGT GCTGACCACG GTGATCGGCC ACCAGGAAGA CAAGGGATGG GCCATCGTCG ACGCCGGCTG GATGGCGATG AGCCGCGACC GCGGCACGCA GAAGCAGCCG CGCGACTTCG GCTACGGGCT GGTGTGCTCG GAACACGGCG AGGTGCTGGG CGAGTACCTG ATGACGGGGG CGAACCAGGA GCACGGCATC GTCACCCGGT CAGACGCGCC GGATCGCGAG ATCGCGCAAC GGTTTCCGGT CGGGACACGG CTGCGGATCC TGCCCAACCA CGCCTGCGCG ACCGGCGCCC AGCATCCCGA ATACCAGGCG CTGGCCGAGA ACGGCACCGT CCAGGCGTGG CCCCGGTTCT ACGGCTGGTG A
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Protein sequence | MRLPSLNTPA ALIDVARMTR NIERMQQRLD ALGVRFRPHV KTTKCEPVVR AQLAAGAQGI TVSTLKEAEQ FFSAGICDIV YAVGMAPARL PQALALRRRG CDLKIVADSV TCAQAIAAFG GEHGEAFDVW IEVDVDGHRS GIAPDDDRLI TVGRVLAEGG MRLGGVLAHA GSSYEYHAHD ALVRIAELER SGCVRAAERL RAAGLPCETV SIGSTPTALS AEHLEGVTEV RAGVYVMFDL VMHNVGVCAL SDIALSVLTT VIGHQEDKGW AIVDAGWMAM SRDRGTQKQP RDFGYGLVCS EHGEVLGEYL MTGANQEHGI VTRSDAPDRE IAQRFPVGTR LRILPNHACA TGAQHPEYQA LAENGTVQAW PRFYGW
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