Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2695 |
Symbol | |
ID | 1221542 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 2902150 |
End bp | 2902653 |
Gene Length | 504 bp |
Protein Length | 167 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637239096 |
Product | signal peptide protein |
Protein accession | NP_520816 |
Protein GI | 17547414 |
COG category | [S] Function unknown |
COG ID | [COG5430] Uncharacterized secreted protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.35651 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGAACAC CTGCCATCAA AGCCCTCGTG GCCATGGCGC TGGGTCTGAC GGCGGTGGCG GCCTCGGCCG CGACCACCAC CACGACCTTC AGCGTCTCGA CCACCGTCAA TGCCACCTGC GTTATCAACT CGGCCAGCGC GTTGACCTTC GCCGCCTTCG ACCCGAGCCA GGGCGCCCAG GCATCGACCT CGTCGATCAG CGTGAACTGC ACCAACACCA CGCCGTTCAA CATCGGCCTG AATGCCGGCA CCGGCACCGG CGCCACAGTG GCCAGCCGCG TCATGACCAG CGGCGCCAAC ACCCTCACGT ACTCGCTCTA CCAGGACTCG GGGCATGCCT CGGTCTGGGG CAACACGGTG GGCACCAACA CCGTGGCGGG AACGGGGGCG GGCATGGCTG CCGGCAACGC CATCACCAAG ACCGTCTATG GCCTGATCCC GAGCCAGCCG AACACCGTGC CGGGCAACTA CGCCGACACC GTGACCGTGA CGGTGACGTA CTAA
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Protein sequence | MRTPAIKALV AMALGLTAVA ASAATTTTTF SVSTTVNATC VINSASALTF AAFDPSQGAQ ASTSSISVNC TNTTPFNIGL NAGTGTGATV ASRVMTSGAN TLTYSLYQDS GHASVWGNTV GTNTVAGTGA GMAAGNAITK TVYGLIPSQP NTVPGNYADT VTVTVTY
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