| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2694 |
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| Symbol | |
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| ID | 1221541 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 2901312 |
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| End bp | 2902073 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637239095 |
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| Product | putative pili assembly chaperone transmembrane protein |
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| Protein accession | NP_520815 |
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| Protein GI | 17547413 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.25409 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAATTC TGCCCATCCG ACAACGTCTG CGCCGATTCG CCATGGGGGT GGCGGGCGCA
GGCATCGGCC TGGCAAGCGT GTTCGCACAG GCCGCAAATT TCACGGTGAC CCCGGTGCGG
GTCGAGCTCT CCCAGCAACG GCCCAGCGCC GCGCTGACGG TGAAGAACGA AATGACCGAC
GAGTCCGTGG TGGTGGAACT GCGCGCCGTG GCATGGACGC AAACCAACGG CGAAGACGTC
TACGCCCCAG CGCAGGACCT GCTGGCGACG CCACCGATCT TCACGCTGGC GCCGGGTGCC
ACGCAGGTGA TCCGCGTGGG CCTGCGCCAC CCGCCCGCCG ACGACGGCGA AGTGAGCTAC
CGCCTCTTCC TGCGCGAAGT GCCGCCGCCG CCCAAGCCGG GCTTTGCCGG CGTGCAGATC
GCGCTCGAAA TGCGCTTGCC GGTCTTTGCC AAGCCGCGCA CGCCTGCCGC ACCGCAACTC
AAGTGGCGGG CCGAGCCGCT GCCAGACGGC GCGCTCGCGC TTTCCGTCAC CAACGACGGC
AACGCGCACG CGCAGGTGGC CAATCTGGTC GTCACGGCGC CGGGTGCCGA GCGGCCGGTC
GCCACGTACC CTGAATTCGC CTATGTCCTG CCTGGGCAAA CGCGGCGGCT GGTGCTCAAG
CGCGGCCCCG ACGCACCGGC GGTCACGGGC GGCACGCTGC ATCTGAAGGC GTACTCCGAT
GCTGGCGACA TCGATTCGGC CCTGGCGCCC GAGACCCGCT AA
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| Protein sequence | MSILPIRQRL RRFAMGVAGA GIGLASVFAQ AANFTVTPVR VELSQQRPSA ALTVKNEMTD
ESVVVELRAV AWTQTNGEDV YAPAQDLLAT PPIFTLAPGA TQVIRVGLRH PPADDGEVSY
RLFLREVPPP PKPGFAGVQI ALEMRLPVFA KPRTPAAPQL KWRAEPLPDG ALALSVTNDG
NAHAQVANLV VTAPGAERPV ATYPEFAYVL PGQTRRLVLK RGPDAPAVTG GTLHLKAYSD
AGDIDSALAP ETR
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