Gene RSc2686 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc2686 
SymbolubiA 
ID1221533 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp2893954 
End bp2894829 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content68% 
IMG OID637239087 
Product4-hydroxybenzoate octaprenyltransferase 
Protein accessionNP_520807 
Protein GI17547405 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases 
TIGRFAM ID[TIGR01474] 4-hydroxybenzoate polyprenyl transferase, proteobacterial 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.179925 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGTCCT CCACCGCCCA CCCCAGCCGT CTCGCGCTCT ACGCCCGCCT GGTGCGCATC 
GACAAGCCGA TCGGCACGCT GCTGCTGCTG TGGCCGACGC TGTGGGCCAT GTGGATGGCG
GCGGATGGGC ACCCGCCGCC GGCGCTGGTG GCGATCTTCG TGGTCGGCAC CGTCCTGATG
CGCTCGGCCG GCTGCGCGAT CAACGACTGG GCCGACCGCG ACTTCGACAA GCACGTCAAG
CGCACCAGGG AACGGCCGCT GACCGCCGGC CTGATTGCGC CCTGGGAGGC GCTGGCCGTG
GCCGCCGTGC TGGCGCTCGT CGCCTTCACG CTGATCCTGC CGCTCAACGC GCTGACCAAG
TGGCTGTCGG TGGCGGCGGT GCTGATTGCC GGCACGTATC CGTTCTTCAA GCGCTTCTTT
GCGATTCCGC AGGCCTACCT GGGCATCGCG TTCGGCTTCG GCATTCCGAT GGCGTATGCC
GCGGTGCAGG ACCAGGTGCC GGCGCCGGCG TGGCTGATGC TGGCCGCCAA CGTGCTGTGG
GCCATTGCTT ACGACACGGC CTATGCGATG GTCGACCGCG ATGACGACCT GCTGATCGGC
ATCCAGACCT CGGCCATCAC CTTCGGCCGC TTCGATGTGG CGGCGATCAT GCTGTGCTAT
GCGGGCTTTT TCGGCATCAT GGCCTGGGTC GGCCATGCGC TGGCGCTCGG CGCGGCGTAT
TGGATCGGAC TGGCCGCGGC GGCGGCGCTG GCAGGCTACT ACTACACATT GCTGCGCACG
CGTGACCGCA TGCAGTGCTT CTTCGTGTTC CGCCACAACA ACTGGTTCGG CGCCTGCGTG
TTCGTGGGCG CGGCGCTTGC CTACGCGCTG CGCTAG
 
Protein sequence
MQSSTAHPSR LALYARLVRI DKPIGTLLLL WPTLWAMWMA ADGHPPPALV AIFVVGTVLM 
RSAGCAINDW ADRDFDKHVK RTRERPLTAG LIAPWEALAV AAVLALVAFT LILPLNALTK
WLSVAAVLIA GTYPFFKRFF AIPQAYLGIA FGFGIPMAYA AVQDQVPAPA WLMLAANVLW
AIAYDTAYAM VDRDDDLLIG IQTSAITFGR FDVAAIMLCY AGFFGIMAWV GHALALGAAY
WIGLAAAAAL AGYYYTLLRT RDRMQCFFVF RHNNWFGACV FVGAALAYAL R