Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2684 |
Symbol | proC |
ID | 1221531 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 2892833 |
End bp | 2893657 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637239085 |
Product | pyrroline-5-carboxylate reductase |
Protein accession | NP_520805 |
Protein GI | 17547403 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0345] Pyrroline-5-carboxylate reductase |
TIGRFAM ID | [TIGR00112] pyrroline-5-carboxylate reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.280791 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGACA CTCTGAAATT CGGCTTCATC GGCGGCGGCA ACATGGCTTC GGCGCTGATC GGCGGCCTGG TCTCCCGCGG CGCCCCGGGC GCCAACATCG TGGTGGTGGA CCCGACCGAG CCGGCCCGCG CGCACGCCGC GCAGACCTGG GGCGCAACCA CCATCGCCGC CCCCGGCGCC GAGCTGGCCG ACCGCGACGT GATCGTGCTG GCCGTCAAGC CGCAGCAGAT GCGAGAAGTC TGCGCGCAAC TGGCCCCGCA CCTGCGTGAC AGCCTGGTGC TGTCGGTGGC GGCCGGCATC CGTATCCAGG ACCTGTCGCG CTGGCTCGGC GGCCATGCCC GCGTCGTGCG TGCCATGCCG AACACGCCGG CGCTGTCGGG CATGGGCATG ACCGGCTTGG CTGCCCGCGC CGGCCTGGGC GGAACCGATC GCGACATCGC CAGCGCCATC GCCAACGCCG TCGGCAAGAG CGTGTGGGTG CCCGACGAAG CGCAGATCGA CGCCGTCACC GCCATTTCCG GCAGCGGTCC GGCCTACGTG TTCTACTTCA TCGAAGCGAT GCAGCAGGTT GCACTGGAAC TGGGCCTGTC GCCCGAGGCA GGCCGCCTGC TGGCGGCGGA AACCTTCATC GGCGCGGCCA CGCTGGCGGA GCAGTCGAGC GAGCCGGTCG AGGTGCTGCG CGAGCGCGTG ACCTCCAAGG GCGGCACGAC CTACGCCGCG CTCACCGCCA TGGATGCGGC CGGCATCAAG CCCGCCTTCG TGCGCGCCAT GCACGCGGCG GCCGCGCGCG GCAAGGCGAT GGGTGAGGAA TTCGGCCGCG ACTGA
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Protein sequence | MLDTLKFGFI GGGNMASALI GGLVSRGAPG ANIVVVDPTE PARAHAAQTW GATTIAAPGA ELADRDVIVL AVKPQQMREV CAQLAPHLRD SLVLSVAAGI RIQDLSRWLG GHARVVRAMP NTPALSGMGM TGLAARAGLG GTDRDIASAI ANAVGKSVWV PDEAQIDAVT AISGSGPAYV FYFIEAMQQV ALELGLSPEA GRLLAAETFI GAATLAEQSS EPVEVLRERV TSKGGTTYAA LTAMDAAGIK PAFVRAMHAA AARGKAMGEE FGRD
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