Gene RSc2684 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc2684 
SymbolproC 
ID1221531 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp2892833 
End bp2893657 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content72% 
IMG OID637239085 
Productpyrroline-5-carboxylate reductase 
Protein accessionNP_520805 
Protein GI17547403 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0345] Pyrroline-5-carboxylate reductase 
TIGRFAM ID[TIGR00112] pyrroline-5-carboxylate reductase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.280791 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGACA CTCTGAAATT CGGCTTCATC GGCGGCGGCA ACATGGCTTC GGCGCTGATC 
GGCGGCCTGG TCTCCCGCGG CGCCCCGGGC GCCAACATCG TGGTGGTGGA CCCGACCGAG
CCGGCCCGCG CGCACGCCGC GCAGACCTGG GGCGCAACCA CCATCGCCGC CCCCGGCGCC
GAGCTGGCCG ACCGCGACGT GATCGTGCTG GCCGTCAAGC CGCAGCAGAT GCGAGAAGTC
TGCGCGCAAC TGGCCCCGCA CCTGCGTGAC AGCCTGGTGC TGTCGGTGGC GGCCGGCATC
CGTATCCAGG ACCTGTCGCG CTGGCTCGGC GGCCATGCCC GCGTCGTGCG TGCCATGCCG
AACACGCCGG CGCTGTCGGG CATGGGCATG ACCGGCTTGG CTGCCCGCGC CGGCCTGGGC
GGAACCGATC GCGACATCGC CAGCGCCATC GCCAACGCCG TCGGCAAGAG CGTGTGGGTG
CCCGACGAAG CGCAGATCGA CGCCGTCACC GCCATTTCCG GCAGCGGTCC GGCCTACGTG
TTCTACTTCA TCGAAGCGAT GCAGCAGGTT GCACTGGAAC TGGGCCTGTC GCCCGAGGCA
GGCCGCCTGC TGGCGGCGGA AACCTTCATC GGCGCGGCCA CGCTGGCGGA GCAGTCGAGC
GAGCCGGTCG AGGTGCTGCG CGAGCGCGTG ACCTCCAAGG GCGGCACGAC CTACGCCGCG
CTCACCGCCA TGGATGCGGC CGGCATCAAG CCCGCCTTCG TGCGCGCCAT GCACGCGGCG
GCCGCGCGCG GCAAGGCGAT GGGTGAGGAA TTCGGCCGCG ACTGA
 
Protein sequence
MLDTLKFGFI GGGNMASALI GGLVSRGAPG ANIVVVDPTE PARAHAAQTW GATTIAAPGA 
ELADRDVIVL AVKPQQMREV CAQLAPHLRD SLVLSVAAGI RIQDLSRWLG GHARVVRAMP
NTPALSGMGM TGLAARAGLG GTDRDIASAI ANAVGKSVWV PDEAQIDAVT AISGSGPAYV
FYFIEAMQQV ALELGLSPEA GRLLAAETFI GAATLAEQSS EPVEVLRERV TSKGGTTYAA
LTAMDAAGIK PAFVRAMHAA AARGKAMGEE FGRD