Gene RSc2669 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc2669 
Symbol 
ID1221516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp2879662 
End bp2880039 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content66% 
IMG OID637239070 
Producthypothetical protein 
Protein accessionNP_520790 
Protein GI17547388 
COG category[R] General function prediction only 
COG ID[COG1380] Putative effector of murein hydrolase LrgA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.293278 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.241183 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGCAAA CCTTCGCCAT CCTGCTGACC TTCCAGTCGG TGGGTGAGCT ATTGAGCTAT 
GCCCTGCATC TGCCGGTGCC CGGACCGGTG ATCGGCATGA TGCTGCTGTT CCTGACCCTG
CTGGCCGACC GCGGCGGCAT CCTGGAAGTC ATGCAGGGCA CGGTGACCGA ACTGCTGCGG
CACCTGTCGA TCCTGTTCGT GCCGGCCGGC GTGGGGGTGA TGGCACAGAT GAACCGCATC
AGCCAGGAAT GGCTGCCGAT CGTGGTGGCG GTCGCGGTCA GCACGTGGCT GGCCATCGGC
GTGTGCGCGC TGGTCACGCG GGCGCTGATG CGCCGCATGG GCGATCGCGG CGAAACGCAC
GAAGAGGTGG CGCCATGA
 
Protein sequence
MLQTFAILLT FQSVGELLSY ALHLPVPGPV IGMMLLFLTL LADRGGILEV MQGTVTELLR 
HLSILFVPAG VGVMAQMNRI SQEWLPIVVA VAVSTWLAIG VCALVTRALM RRMGDRGETH
EEVAP