Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2669 |
Symbol | |
ID | 1221516 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 2879662 |
End bp | 2880039 |
Gene Length | 378 bp |
Protein Length | 125 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637239070 |
Product | hypothetical protein |
Protein accession | NP_520790 |
Protein GI | 17547388 |
COG category | [R] General function prediction only |
COG ID | [COG1380] Putative effector of murein hydrolase LrgA |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.293278 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.241183 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCTGCAAA CCTTCGCCAT CCTGCTGACC TTCCAGTCGG TGGGTGAGCT ATTGAGCTAT GCCCTGCATC TGCCGGTGCC CGGACCGGTG ATCGGCATGA TGCTGCTGTT CCTGACCCTG CTGGCCGACC GCGGCGGCAT CCTGGAAGTC ATGCAGGGCA CGGTGACCGA ACTGCTGCGG CACCTGTCGA TCCTGTTCGT GCCGGCCGGC GTGGGGGTGA TGGCACAGAT GAACCGCATC AGCCAGGAAT GGCTGCCGAT CGTGGTGGCG GTCGCGGTCA GCACGTGGCT GGCCATCGGC GTGTGCGCGC TGGTCACGCG GGCGCTGATG CGCCGCATGG GCGATCGCGG CGAAACGCAC GAAGAGGTGG CGCCATGA
|
Protein sequence | MLQTFAILLT FQSVGELLSY ALHLPVPGPV IGMMLLFLTL LADRGGILEV MQGTVTELLR HLSILFVPAG VGVMAQMNRI SQEWLPIVVA VAVSTWLAIG VCALVTRALM RRMGDRGETH EEVAP
|
| |