| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2666 |
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| Symbol | glcD |
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| ID | 1221513 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 2875731 |
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| End bp | 2877224 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637239067 |
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| Product | glycolate oxidase FAD-linked subunit oxidoreductase |
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| Protein accession | NP_520787 |
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| Protein GI | 17547385 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
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| TIGRFAM ID | [TIGR00387] glycolate oxidase, subunit GlcD |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.530486 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.344368 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCGC CGCTGCCCGC CGCCGCCCGC GATCCGTCTG CCGTGCAGGC CGAGCTGATC
GCCGCGCTGT CGCCCCTGAT GCCCGCCGAT GCCCTGCTGT GGGAGCGCGA AGACACCACC
CCCTACGAAT GCGACGGTCT CGCCGCCTAC CGGCAGGTGC CGCTGGCCGT GGCGCTGCCG
GACAGCGAAG CGCAGGTCGT GGAGATCCTG CGCGCCTGCC ACCGCCTGGG CGTGCCGGTG
GTGCCGCGCG GCGCCGGCAC CAGCCTGTCG GGCGGCGCGA TGCCGACGCC GGGCGGACTG
GTGCTGTCGC TGGCCAAGTT CAAGCGCATC CTGAAGCTCG ACCCGCACAC CCGCACCGCG
GCCGTGCAGC CGGGCGTGCG CAACCTGGCC ATCTCGGAGG CCGCCGCGCC GCACGGGCTG
TACTACGCGC CCGATCCGTC GTCGCAGATC GCCTGCACCA TCGGCGGCAA CGTCAGCGAG
AACTCCGGCG GCGTGCATTG CCTGAAGTAC GGCCTGACCG TGCACAACGT GCTGCGCGTG
CGCGCCGTGA TGATGGACGG CGAGGTGGTC GAGTTCGGCA GCGAGGCACC CGACGCGCCC
GGCCTGGACC TGCTCGCCGC CGTGATCGGC TCCGAAGGCA TGCTGGCCGT GGTGACGGAG
GTGACCGTGC GGCTGGTGCC CAAGCCGCAG CTGGCGCAGG TCATCATGGC GAGCTTCGAT
GACGTGGAAG CGGGCGGCAA TGCGGTGGCC GAGGTGATCG CCGCCGGCAT CATCCCGGCC
GGGCTGGAGA TGATGGACAA GCCCGCCACC GCCGCCGTCG AGGAATTCGT TCGCGCCGGC
TACGACCTGG ACGCCGCGGC CATCCTGCTG TGCGAATCCG ACGGCACGCC CGAAGAGGTG
GCCGAAGAGA TCGCACGGAT GAGCGAGGTG CTGCGCGCCT CCGGCGCCAC CCGCATCCAG
GTGTCGCAGA GCGAGGCCGA GCGGCTGAAA TTCTGGAGCG GCCGCAAGAA TGCCTTCCCG
GCCGCCGGGC GCATCTCGCC GGACTACTAC TGCATGGACG GCACCATCCC GCGCAAGCAC
ATCGGCACGC TGCTCAAGCG CATCCAGCAG ATGGAGCAAA ACTACGCGCT GCGCTGCATC
AACGTCTTCC ACGCCGGCGA CGGCAACATG CACCCGCTGA TCCTCTTCAA CGGCGAAGAC
CAGGATGAAT GGCACCGCGC CGAGCTGTTC GGCGCGGACA TCCTCGAGAC CTGCGTGGAG
CTGGGCGGCA CCGTCACCGG CGAGCATGGC GTGGGGGTCG AGAAGCTCAA TTCGATGTGC
GTGCAGTTCT CGGCCGAGGA GCGCGATGCC TTCCTGCGCG TCAAGGCCGC CTTCGATCCG
GCGCGCCTGC TGAACCCAGA CAAGGCCATC CCCACGCTCG CGCGCTGCGC CGAATACGGC
AAGCTGCACG TGCGCAACGG CCTGCTGCCG CACCCCGACC TGCCGCGCTT CTGA
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| Protein sequence | MNAPLPAAAR DPSAVQAELI AALSPLMPAD ALLWEREDTT PYECDGLAAY RQVPLAVALP
DSEAQVVEIL RACHRLGVPV VPRGAGTSLS GGAMPTPGGL VLSLAKFKRI LKLDPHTRTA
AVQPGVRNLA ISEAAAPHGL YYAPDPSSQI ACTIGGNVSE NSGGVHCLKY GLTVHNVLRV
RAVMMDGEVV EFGSEAPDAP GLDLLAAVIG SEGMLAVVTE VTVRLVPKPQ LAQVIMASFD
DVEAGGNAVA EVIAAGIIPA GLEMMDKPAT AAVEEFVRAG YDLDAAAILL CESDGTPEEV
AEEIARMSEV LRASGATRIQ VSQSEAERLK FWSGRKNAFP AAGRISPDYY CMDGTIPRKH
IGTLLKRIQQ MEQNYALRCI NVFHAGDGNM HPLILFNGED QDEWHRAELF GADILETCVE
LGGTVTGEHG VGVEKLNSMC VQFSAEERDA FLRVKAAFDP ARLLNPDKAI PTLARCAEYG
KLHVRNGLLP HPDLPRF
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