Gene RSc2660 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc2660 
SymbolaroG1 
ID1221507 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp2869768 
End bp2870847 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content66% 
IMG OID637239061 
Productphospho-2-dehydro-3-deoxyheptonate aldolase 
Protein accessionNP_520781 
Protein GI17547379 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0722] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase 
TIGRFAM ID[TIGR00034] phospho-2-dehydro-3-deoxyheptonate aldolase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.493931 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAAGA ACACCGACGA CCTGCGCATT CGCGAACTGA AAGAGCTGAC CCCGCCGGCG 
CACCTGATCC GCGAATTCCC GTGCAACGAC GCCGTTTCCG AGCTGATCTA CCAGAGCCGC
ACGGCGATGC ACCGCATCCT GCACGGCATG GACGACCGCC TGATCGTCAT CATCGGGCCG
TGCTCGATCC ACGACACCAA GGCCGCCCTC GACTACGCGC GCCGCCTGGT CGAACAGCGC
GAGCGCTTCA AGGCCGACCT GGAAATCGTC ATGCGCGTGT ACTTCGAGAA GCCGCGCACC
ACGGTCGGCT GGAAGGGCCT GATCAACGAC CCGTACATGG ACGGCAGCTT CAAGATCAAC
GACGGCCTGC GCACCGCGCG CGAGCTGCTG GTGAACATCA ACGAGCTGGG CGTGCCGGCG
GGCACCGAAT ACCTCGACAT GATCAGCCCG CAGTACATCG CCGACCTGGT GAGCTGGGGC
GCGATCGGGG CGCGCACGAC CGAATCGCAG GTGCACCGCG AACTCGCCTC CGGACTGTCG
TGCCCGGTCG GCTTCAAGAA CGGCACCGAT GGCAACGTGA AGATCGCCGT GGACGCGATC
AAGGCGGCGT CGCAGCCGCA CCACTTCCTG TCGGTCACCA AGGGCGGCCA CTCGGCCATC
GTGTCGACGG CGGGCAACGA GGATTGCCAC ATCATCCTGC GCGGCGGCAA GGCGCCCAAC
TACGATGCCG CCAGCGTGCA GGCGGCCTGC GAAGACATCG CCAAGTCCGG CCTGGCCGCG
CGCCTGATGA TCGATGCCTC GCACGCCAAC AGCAGCAAGA AGCACGAGAA CCAGATCCCG
GTCTGCGAAG ACATCGGCCG CCAGATCGCC GGCGGCGACG ACCGCATCGT CGGCGTGATG
GTGGAATCGC ACATCAATGC CGGCCGCCAG GACCACGTGC AGGGCACCCC GGTCGAGGAC
CTGAACTACG GCCAGAGCGT GACCGACGCC TGCATCGGCT GGGACGATTC GCTCAAGGTA
CTGGAAACGC TGGCCGACGC CGTGCGCAAG CGCCGGCTGG TGCCCCGCAA CGGCAACTGA
 
Protein sequence
MPKNTDDLRI RELKELTPPA HLIREFPCND AVSELIYQSR TAMHRILHGM DDRLIVIIGP 
CSIHDTKAAL DYARRLVEQR ERFKADLEIV MRVYFEKPRT TVGWKGLIND PYMDGSFKIN
DGLRTARELL VNINELGVPA GTEYLDMISP QYIADLVSWG AIGARTTESQ VHRELASGLS
CPVGFKNGTD GNVKIAVDAI KAASQPHHFL SVTKGGHSAI VSTAGNEDCH IILRGGKAPN
YDAASVQAAC EDIAKSGLAA RLMIDASHAN SSKKHENQIP VCEDIGRQIA GGDDRIVGVM
VESHINAGRQ DHVQGTPVED LNYGQSVTDA CIGWDDSLKV LETLADAVRK RRLVPRNGN