Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2659 |
Symbol | tldD |
ID | 1221506 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 2867915 |
End bp | 2869375 |
Gene Length | 1461 bp |
Protein Length | 486 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637239060 |
Product | TldD protein |
Protein accession | NP_520780 |
Protein GI | 17547378 |
COG category | [R] General function prediction only |
COG ID | [COG0312] Predicted Zn-dependent proteases and their inactivated homologs |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACGCAG GCGACATCGC CATCCAGAAT CTCTCCGTCG CGCGCCGTGT GCTGCTCGAT CCGTATGGCC TCGACGAGGC CCAGTTGCAG CGCGCGCTGG CCGACATCTT CACCCACCGC GTCGACTACG CCGACCTCTA CTTCCAGTAC ACCCGCAACG AGGCCTGGAG CCTCGAGGAA GGCATCGTCA AGTCGGGCAG CTTCAGCATC GACCAGGGCG TTGGCGTGCG CGCGGTCTCT GGCGAGCGCA CCGCCTTCGC CTATTCCGAC GACATCAGCC TGCCGGCGCT GATGCAGGCG GCCGCGGCCA CCCGCACCAT CGGCCGCGCG GGCGCCGGGC GCGTCAAGGT GGCCGGCAGC CTGCAGAGCC AGGGCGGTCG CGCACTGTAT ACCCCCAACG ACCCGCTCGA CTCGATGACG GCATCGGAGA AGGTGGCGCT GCTGGAGCGC ATCGAAAAGC TCGCGCGCGC CAAGGACCCG CGCGTGGTGC AGGTGATGGC GGGTCTAGCC GGCGAGTACG ACGTGATGCT GGTCGCACGC AGCGACGGCG TGATCGCCGC CGACGTGCGG CCGCTGGTGC GGGTCTCGGT CACCGTCATC GCCGAGCAGA ACGGGCGCCG CGAGATGGGC AACTCGGGCG GCGGCGGCCG CTACGCCTAC GGCTACTTCA CCGACGAGCT GCTGCATCAG TACGTGGACG AAGCCGTCTC CTCCGCGCTG GTCAACCTGG AAGCCAAGCC GGCGCCGGCC GGCGCCATGA CCGTGGTGCT CGGCCCGGGC TGGCCCGGCG TGCTGCTGCA CGAGGCGATC GGCCACGGGC TGGAGGGCGA CTTCAACCGC AAGGGCTCGT CCGCCTTCTC GGGCCGCATG GGCGAACGCG TGGCGGCCAA GGGCGTGACC GTAGTGGACG ACGGCACGCT GCCCAACCGC CGCGGCTCGC TCAACCTCGA CGACGAGGGC AATCCCACGC AGTGCAACAC CCTGATCGAA GACGGCATCC TGACCGGCTA CATGCAGGAC ACGCTCAACG CGCGCCTGAT GAAGATGCCC GTGACCGGCA ACGCGCGCCG CGAAAGCTAC GCGTCCCTGC CGATGCCGCG CATGACCAAC ACCTACATGC TCGGCGGCGA CAAGGATCCG CAGGAGATCA TTGCCAGCGT CAAGCGCGGC CTCTATGCCG TCAACTTCGG CGGCGGCCAG GTCGACATCA CCAACGGCAA GTTCGTGTTC TCGGCCAGCG AGGCCTACCT GATCGAGGAC GGCAAGATCA CCACGCCGGT CAAGGGCGCC ACGCTGGTCG GCAACGGCCC TGAATCGCTC AAGGACGTCA CCATGATCGG CAACGACATG CGCCTCGATT CGGGCGTCGG CGTGTGCGGC AAGGAAGGCC AGAGCGTGCC GGTGGGCGTG GGCCAACCGA CCCTGCGCAT CGAAAACATG ACGGTGGGCG GCACGGCCTG A
|
Protein sequence | MNAGDIAIQN LSVARRVLLD PYGLDEAQLQ RALADIFTHR VDYADLYFQY TRNEAWSLEE GIVKSGSFSI DQGVGVRAVS GERTAFAYSD DISLPALMQA AAATRTIGRA GAGRVKVAGS LQSQGGRALY TPNDPLDSMT ASEKVALLER IEKLARAKDP RVVQVMAGLA GEYDVMLVAR SDGVIAADVR PLVRVSVTVI AEQNGRREMG NSGGGGRYAY GYFTDELLHQ YVDEAVSSAL VNLEAKPAPA GAMTVVLGPG WPGVLLHEAI GHGLEGDFNR KGSSAFSGRM GERVAAKGVT VVDDGTLPNR RGSLNLDDEG NPTQCNTLIE DGILTGYMQD TLNARLMKMP VTGNARRESY ASLPMPRMTN TYMLGGDKDP QEIIASVKRG LYAVNFGGGQ VDITNGKFVF SASEAYLIED GKITTPVKGA TLVGNGPESL KDVTMIGNDM RLDSGVGVCG KEGQSVPVGV GQPTLRIENM TVGGTA
|
| |