Gene RSc2659 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc2659 
SymboltldD 
ID1221506 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp2867915 
End bp2869375 
Gene Length1461 bp 
Protein Length486 aa 
Translation table11 
GC content69% 
IMG OID637239060 
ProductTldD protein 
Protein accessionNP_520780 
Protein GI17547378 
COG category[R] General function prediction only 
COG ID[COG0312] Predicted Zn-dependent proteases and their inactivated homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCAG GCGACATCGC CATCCAGAAT CTCTCCGTCG CGCGCCGTGT GCTGCTCGAT 
CCGTATGGCC TCGACGAGGC CCAGTTGCAG CGCGCGCTGG CCGACATCTT CACCCACCGC
GTCGACTACG CCGACCTCTA CTTCCAGTAC ACCCGCAACG AGGCCTGGAG CCTCGAGGAA
GGCATCGTCA AGTCGGGCAG CTTCAGCATC GACCAGGGCG TTGGCGTGCG CGCGGTCTCT
GGCGAGCGCA CCGCCTTCGC CTATTCCGAC GACATCAGCC TGCCGGCGCT GATGCAGGCG
GCCGCGGCCA CCCGCACCAT CGGCCGCGCG GGCGCCGGGC GCGTCAAGGT GGCCGGCAGC
CTGCAGAGCC AGGGCGGTCG CGCACTGTAT ACCCCCAACG ACCCGCTCGA CTCGATGACG
GCATCGGAGA AGGTGGCGCT GCTGGAGCGC ATCGAAAAGC TCGCGCGCGC CAAGGACCCG
CGCGTGGTGC AGGTGATGGC GGGTCTAGCC GGCGAGTACG ACGTGATGCT GGTCGCACGC
AGCGACGGCG TGATCGCCGC CGACGTGCGG CCGCTGGTGC GGGTCTCGGT CACCGTCATC
GCCGAGCAGA ACGGGCGCCG CGAGATGGGC AACTCGGGCG GCGGCGGCCG CTACGCCTAC
GGCTACTTCA CCGACGAGCT GCTGCATCAG TACGTGGACG AAGCCGTCTC CTCCGCGCTG
GTCAACCTGG AAGCCAAGCC GGCGCCGGCC GGCGCCATGA CCGTGGTGCT CGGCCCGGGC
TGGCCCGGCG TGCTGCTGCA CGAGGCGATC GGCCACGGGC TGGAGGGCGA CTTCAACCGC
AAGGGCTCGT CCGCCTTCTC GGGCCGCATG GGCGAACGCG TGGCGGCCAA GGGCGTGACC
GTAGTGGACG ACGGCACGCT GCCCAACCGC CGCGGCTCGC TCAACCTCGA CGACGAGGGC
AATCCCACGC AGTGCAACAC CCTGATCGAA GACGGCATCC TGACCGGCTA CATGCAGGAC
ACGCTCAACG CGCGCCTGAT GAAGATGCCC GTGACCGGCA ACGCGCGCCG CGAAAGCTAC
GCGTCCCTGC CGATGCCGCG CATGACCAAC ACCTACATGC TCGGCGGCGA CAAGGATCCG
CAGGAGATCA TTGCCAGCGT CAAGCGCGGC CTCTATGCCG TCAACTTCGG CGGCGGCCAG
GTCGACATCA CCAACGGCAA GTTCGTGTTC TCGGCCAGCG AGGCCTACCT GATCGAGGAC
GGCAAGATCA CCACGCCGGT CAAGGGCGCC ACGCTGGTCG GCAACGGCCC TGAATCGCTC
AAGGACGTCA CCATGATCGG CAACGACATG CGCCTCGATT CGGGCGTCGG CGTGTGCGGC
AAGGAAGGCC AGAGCGTGCC GGTGGGCGTG GGCCAACCGA CCCTGCGCAT CGAAAACATG
ACGGTGGGCG GCACGGCCTG A
 
Protein sequence
MNAGDIAIQN LSVARRVLLD PYGLDEAQLQ RALADIFTHR VDYADLYFQY TRNEAWSLEE 
GIVKSGSFSI DQGVGVRAVS GERTAFAYSD DISLPALMQA AAATRTIGRA GAGRVKVAGS
LQSQGGRALY TPNDPLDSMT ASEKVALLER IEKLARAKDP RVVQVMAGLA GEYDVMLVAR
SDGVIAADVR PLVRVSVTVI AEQNGRREMG NSGGGGRYAY GYFTDELLHQ YVDEAVSSAL
VNLEAKPAPA GAMTVVLGPG WPGVLLHEAI GHGLEGDFNR KGSSAFSGRM GERVAAKGVT
VVDDGTLPNR RGSLNLDDEG NPTQCNTLIE DGILTGYMQD TLNARLMKMP VTGNARRESY
ASLPMPRMTN TYMLGGDKDP QEIIASVKRG LYAVNFGGGQ VDITNGKFVF SASEAYLIED
GKITTPVKGA TLVGNGPESL KDVTMIGNDM RLDSGVGVCG KEGQSVPVGV GQPTLRIENM
TVGGTA