Gene RSc2646 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc2646 
SymbolhutH 
ID1221493 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp2846329 
End bp2847885 
Gene Length1557 bp 
Protein Length518 aa 
Translation table11 
GC content72% 
IMG OID637239047 
Producthistidine ammonia-lyase 
Protein accessionNP_520767 
Protein GI17547365 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2986] Histidine ammonia-lyase 
TIGRFAM ID[TIGR01225] histidine ammonia-lyase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0281382 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.523313 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACCA TGACCACGCC TTCCATCCTG ACGCTGCATC CGGGCGAGAT GACCTTTGCC 
GACCTGCGCC GCGTCTGGCT GGCTCCCACG CCGGTGACGC TGTCGGGCGA TTGCGCCGCG
GCCATCGAGG CCTCGGCGGC GACCGTGCAG GCCATCGTCG CCAGGGGCGA GCCCGCCTAC
GGCATCAATA CCGGCTTCGG CAAGCTGGCC AGGACGCAGA TCGCCACGCA CGAGCTGGAG
CACCTGCAGC GCAACCTGAT CCTGTCGCAC GCGGTCGGCA CCGGCCAGGA TCTCGACGAC
AATGTCGCGC GCCTGGTGCT GCTGATGAAG GCCGCCAGCC TCGCGCGCGG CTACTCCGGG
GTGCGCCGCG TCGTCATCGA CACGCTGCTG GCGATGCTCA ACGCGGGCAT CGTGCCGTGC
ATTCCGTCCA AGGGCTCGGT GGGCGCCTCC GGCGACCTGG CGCCGCTCGC GCACATGACC
CTGGCCATGC TGGGCGAGGG CGACGCGCGC GTGAACGGCG TGCGCAAGCC GGCACGCGAA
GCCCTGGCCG CGGCGGGTAT CGCGCCCATC GCGCTGGCCG CCAAAGAGGG GCTGGCGCTG
ATCAACGGCA CCCAGGTGTC GACCGCGCTG GCGCTCAACG GCCTGTTCCT GGCCGAGCGC
CTGCTGCAGG CGGCCACCGT GGCCGGCGCG CTGTCGGTCG ATGCGGCCAA GGGCAGCGAC
GCGCCGTTCG ACCCGCGCGT GCACACGGTG CGCGGGCAGG CCGGGCAGAT CGCCACCGCC
GCGGTCTATC GCGGCCTGCT GGCCGGCAGC GCCATCCGCC GCTCGCACCT GGTCGGCGAC
ACGCGCGTGC AGGACCCGTA CAGCCTGCGC TGCCAGCCGC AGGTGATGGG CGCGTGCCTG
GACCTGATCC GCCAGGCCGG CGCCACGCTG CTCACCGAAG CCAACGCCGT CACCGACAAC
CCGCTGGTCT ACGCCGATGC GGGCGAGGTG ATCTCGGGCG GCAACTTCCA CGCCGAGCCG
GTCGCCTTTG CCGCCGACAT GCTGGCACTG GCGATCGCCG AGATCGGCGC GCTGTCGGAG
CGGCGGATCG CGCTGCTGAT CGATTCCACG CTGTCGGGCC TGCCGCCGTT CCTGGTCGAG
CAGCCGGGGC TGAATTCCGG CTTCATGATC GCGCACGTGA CAGCGGCCGC GCTGGCCTCG
GAGAACAAGT CGCTGGCGCA TCCGGCCAGC GTCGACAGCC TGCCGACCTC CGCCAACCAG
GAAGACCACG TCAGCATGGC CACCTTCGCC GGCCGCCGCC TGGCCGAGAT GGCCGGCAAC
ACCGCCACCA TCGTCGGCAT CGAGGCGCTG GCCGCCGCGC AGGGCATCGA CTTCCACCGG
CCGCTCGCCA CCTCCGACGC GCTGGCGCGC GCCCACACGT GCATCCGCTC GCGCGTGGCG
TACTACGGTG AAGACCGTCT GTTCGCGCCC GACATCGAAG CGGCCCGCCG CCTCGTGCTC
GACGGCGACC TGGGCGACAG CTGCCGCGCG CACCTGGCCG ATCTGGCGCT CGCATGA
 
Protein sequence
MNTMTTPSIL TLHPGEMTFA DLRRVWLAPT PVTLSGDCAA AIEASAATVQ AIVARGEPAY 
GINTGFGKLA RTQIATHELE HLQRNLILSH AVGTGQDLDD NVARLVLLMK AASLARGYSG
VRRVVIDTLL AMLNAGIVPC IPSKGSVGAS GDLAPLAHMT LAMLGEGDAR VNGVRKPARE
ALAAAGIAPI ALAAKEGLAL INGTQVSTAL ALNGLFLAER LLQAATVAGA LSVDAAKGSD
APFDPRVHTV RGQAGQIATA AVYRGLLAGS AIRRSHLVGD TRVQDPYSLR CQPQVMGACL
DLIRQAGATL LTEANAVTDN PLVYADAGEV ISGGNFHAEP VAFAADMLAL AIAEIGALSE
RRIALLIDST LSGLPPFLVE QPGLNSGFMI AHVTAAALAS ENKSLAHPAS VDSLPTSANQ
EDHVSMATFA GRRLAEMAGN TATIVGIEAL AAAQGIDFHR PLATSDALAR AHTCIRSRVA
YYGEDRLFAP DIEAARRLVL DGDLGDSCRA HLADLALA