Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2646 |
Symbol | hutH |
ID | 1221493 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 2846329 |
End bp | 2847885 |
Gene Length | 1557 bp |
Protein Length | 518 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637239047 |
Product | histidine ammonia-lyase |
Protein accession | NP_520767 |
Protein GI | 17547365 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2986] Histidine ammonia-lyase |
TIGRFAM ID | [TIGR01225] histidine ammonia-lyase |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0281382 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.523313 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATACCA TGACCACGCC TTCCATCCTG ACGCTGCATC CGGGCGAGAT GACCTTTGCC GACCTGCGCC GCGTCTGGCT GGCTCCCACG CCGGTGACGC TGTCGGGCGA TTGCGCCGCG GCCATCGAGG CCTCGGCGGC GACCGTGCAG GCCATCGTCG CCAGGGGCGA GCCCGCCTAC GGCATCAATA CCGGCTTCGG CAAGCTGGCC AGGACGCAGA TCGCCACGCA CGAGCTGGAG CACCTGCAGC GCAACCTGAT CCTGTCGCAC GCGGTCGGCA CCGGCCAGGA TCTCGACGAC AATGTCGCGC GCCTGGTGCT GCTGATGAAG GCCGCCAGCC TCGCGCGCGG CTACTCCGGG GTGCGCCGCG TCGTCATCGA CACGCTGCTG GCGATGCTCA ACGCGGGCAT CGTGCCGTGC ATTCCGTCCA AGGGCTCGGT GGGCGCCTCC GGCGACCTGG CGCCGCTCGC GCACATGACC CTGGCCATGC TGGGCGAGGG CGACGCGCGC GTGAACGGCG TGCGCAAGCC GGCACGCGAA GCCCTGGCCG CGGCGGGTAT CGCGCCCATC GCGCTGGCCG CCAAAGAGGG GCTGGCGCTG ATCAACGGCA CCCAGGTGTC GACCGCGCTG GCGCTCAACG GCCTGTTCCT GGCCGAGCGC CTGCTGCAGG CGGCCACCGT GGCCGGCGCG CTGTCGGTCG ATGCGGCCAA GGGCAGCGAC GCGCCGTTCG ACCCGCGCGT GCACACGGTG CGCGGGCAGG CCGGGCAGAT CGCCACCGCC GCGGTCTATC GCGGCCTGCT GGCCGGCAGC GCCATCCGCC GCTCGCACCT GGTCGGCGAC ACGCGCGTGC AGGACCCGTA CAGCCTGCGC TGCCAGCCGC AGGTGATGGG CGCGTGCCTG GACCTGATCC GCCAGGCCGG CGCCACGCTG CTCACCGAAG CCAACGCCGT CACCGACAAC CCGCTGGTCT ACGCCGATGC GGGCGAGGTG ATCTCGGGCG GCAACTTCCA CGCCGAGCCG GTCGCCTTTG CCGCCGACAT GCTGGCACTG GCGATCGCCG AGATCGGCGC GCTGTCGGAG CGGCGGATCG CGCTGCTGAT CGATTCCACG CTGTCGGGCC TGCCGCCGTT CCTGGTCGAG CAGCCGGGGC TGAATTCCGG CTTCATGATC GCGCACGTGA CAGCGGCCGC GCTGGCCTCG GAGAACAAGT CGCTGGCGCA TCCGGCCAGC GTCGACAGCC TGCCGACCTC CGCCAACCAG GAAGACCACG TCAGCATGGC CACCTTCGCC GGCCGCCGCC TGGCCGAGAT GGCCGGCAAC ACCGCCACCA TCGTCGGCAT CGAGGCGCTG GCCGCCGCGC AGGGCATCGA CTTCCACCGG CCGCTCGCCA CCTCCGACGC GCTGGCGCGC GCCCACACGT GCATCCGCTC GCGCGTGGCG TACTACGGTG AAGACCGTCT GTTCGCGCCC GACATCGAAG CGGCCCGCCG CCTCGTGCTC GACGGCGACC TGGGCGACAG CTGCCGCGCG CACCTGGCCG ATCTGGCGCT CGCATGA
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Protein sequence | MNTMTTPSIL TLHPGEMTFA DLRRVWLAPT PVTLSGDCAA AIEASAATVQ AIVARGEPAY GINTGFGKLA RTQIATHELE HLQRNLILSH AVGTGQDLDD NVARLVLLMK AASLARGYSG VRRVVIDTLL AMLNAGIVPC IPSKGSVGAS GDLAPLAHMT LAMLGEGDAR VNGVRKPARE ALAAAGIAPI ALAAKEGLAL INGTQVSTAL ALNGLFLAER LLQAATVAGA LSVDAAKGSD APFDPRVHTV RGQAGQIATA AVYRGLLAGS AIRRSHLVGD TRVQDPYSLR CQPQVMGACL DLIRQAGATL LTEANAVTDN PLVYADAGEV ISGGNFHAEP VAFAADMLAL AIAEIGALSE RRIALLIDST LSGLPPFLVE QPGLNSGFMI AHVTAAALAS ENKSLAHPAS VDSLPTSANQ EDHVSMATFA GRRLAEMAGN TATIVGIEAL AAAQGIDFHR PLATSDALAR AHTCIRSRVA YYGEDRLFAP DIEAARRLVL DGDLGDSCRA HLADLALA
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