Gene RSc2642 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc2642 
SymbolhslR 
ID1221489 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp2842564 
End bp2842959 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content70% 
IMG OID637239043 
Productputative heat shock protein 15 
Protein accessionNP_520763 
Protein GI17547361 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1188] Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.351064 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGTGA GCACCGACGC GGATGGCCGC GTGCGCATCG ACAAATGGCT GTGGGCGGCG 
CGCTTCTTCA AGACACGCTC GCAGGCGACC GATGCGGTGG AGCGTGGCCG CGTGCAGATC
AACGACCAGC CGGTGCGTCC GGCCAAGGAC GTGAAGATCG GCGACCGCGT GCGCGTGGCC
GCGCATGAAC AGCAGTGGGA GGTGAATGTG CTGGCGCTGG CGGAAGTCCG CGGGCCCGCC
TCGGTGGCGC AGACCCTCTA CGCCGAGACG CAGGCGAGCC GCTTAAAACG TGTCGGGGCG
GCGCAGCAGC GGCACCTGTA CCGGGAACCC GCCACGCAGA TCGCCGGCCG GCCGACCAAG
CGCGACCGGC GCCGCATCGA TAAGCTGGGC GGATGA
 
Protein sequence
MKVSTDADGR VRIDKWLWAA RFFKTRSQAT DAVERGRVQI NDQPVRPAKD VKIGDRVRVA 
AHEQQWEVNV LALAEVRGPA SVAQTLYAET QASRLKRVGA AQQRHLYREP ATQIAGRPTK
RDRRRIDKLG G