Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2636 |
Symbol | rnk |
ID | 1221483 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 2840328 |
End bp | 2840732 |
Gene Length | 405 bp |
Protein Length | 134 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637239037 |
Product | putative regulator of nucleoside diphosphate kinase transcription regulator protein |
Protein accession | NP_520757 |
Protein GI | 17547355 |
COG category | [K] Transcription |
COG ID | [COG0782] Transcription elongation factor |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.158665 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGCAG CCGTCATCTA CCTGACCGAG CTCGACCTCA CCCGACTGGA AAACGCCGCC GTTCGCGCCG GCAGCGGCTC GCCGCTGGCC GGGCTGGTCG ACGACCTGAT TGTCCGCGCC AACGTTGTTC CCGGCGACAG GATTCCCGCC GACGTGGTGA CGATGAATTC AGTGGTGCGC GTGCACGCTG GCGCCGGTAC GGCCCAGGAG TGGACGCTGG TCTATCCGGA CGAGGCCAAC CTGGCCGCGG CCAGGCTCTC GGTGCTGTCG CCGATGGGCG CGGCGCTGCT CGGCGGCCGC GCGGGCGACG AGGTGCACTA TGCCGCGCCG GACGGCTCTA CGCACGCACT GCGGATCGAC GCGATCGTCT TTCAGCCCGA GGCAGCCGGC CACTACACCT TGTGA
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Protein sequence | MSAAVIYLTE LDLTRLENAA VRAGSGSPLA GLVDDLIVRA NVVPGDRIPA DVVTMNSVVR VHAGAGTAQE WTLVYPDEAN LAAARLSVLS PMGAALLGGR AGDEVHYAAP DGSTHALRID AIVFQPEAAG HYTL
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