| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2626 |
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| Symbol | |
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| ID | 1221473 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 2829146 |
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| End bp | 2829820 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637239027 |
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| Product | putative hydrolase protein |
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| Protein accession | NP_520747 |
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| Protein GI | 17547345 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0560] Phosphoserine phosphatase |
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| TIGRFAM ID | [TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like
[TIGR01490] HAD-superfamily subfamily IB hydrolase, TIGR01490 |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0368297 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.12762 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATCTCG CCCTCTTTGA CCTCGATCAC ACCCTGATCC CCACCGACAG CGACCACGAG
TGGGGGCGCT TCCTCATCCG CCGCGGGGTC GTGGATGCAG CCGAATACCA GCGCAGGAAC
GATCAGTTCT ATGCCGACTA CAAGTCCGGC ACGCTGGACA TCCATGCCTT CCTGCGCTTT
GCCCTGGCGC CGCTCGCCGC CCACTCGCGC GATACGCTGG CCCAGTGGCA TGCCGAATTC
ATGCGCGAGA CGATCCTGCC CAAGATCACG CCCCAGGCCC AGGCGCTGGT TTGCAAGCAC
CTGGACGCCG GCGACCTGTG CTGCGTGGTC ACCGCCACCA ACAGCTTCGT CACCCGGCCG
ATCGCCAAGG CCTTCGGCAT CGAGCACCTG ATCGCCACGG AGCCGGCCAC CGCCGACGGC
ACGCCCGAAG GCCCCTTCAC CGGTGACGTC TCCGGCACAC CGAGCTTCCG CGAGGGCAAG
GTCGCGCGCG TGCACGAGTG GCTCGCCGAC ATGGGCCGCG GCTGGAGCGA CTTCGATCGC
AGCACCTTCT ACAGCGATTC GGCCAACGAC GTGCCGCTGC TGGAAGAAGT GACCGACCCG
GTCGCCACCA ACCCCGACGA CACCTTGCGG CACCTCGCCG CCCAGCGCAA CTGGCGCATC
ATGGACCTCT TCTGA
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| Protein sequence | MNLALFDLDH TLIPTDSDHE WGRFLIRRGV VDAAEYQRRN DQFYADYKSG TLDIHAFLRF
ALAPLAAHSR DTLAQWHAEF MRETILPKIT PQAQALVCKH LDAGDLCCVV TATNSFVTRP
IAKAFGIEHL IATEPATADG TPEGPFTGDV SGTPSFREGK VARVHEWLAD MGRGWSDFDR
STFYSDSAND VPLLEEVTDP VATNPDDTLR HLAAQRNWRI MDLF
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