| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2622 |
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| Symbol | |
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| ID | 1221469 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 2824600 |
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| End bp | 2825802 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637239023 |
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| Product | integrase protein |
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| Protein accession | NP_520743 |
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| Protein GI | 17547341 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0582] Integrase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.561112 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.109435 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAAGA TCAAGCTCAC CAAATCCGCA GTCGATGCGG CACAACCCCA AGCGCAGGCT
GTCGAACTCA GGGATACCCT GGTGCCCGGC TTCTTGTGCA AGGTTACCCC ATCGGGCCGC
AAGGTGTTCA TGCTCCAGTA CCGGACGAAC GCCGGCGAGC GCCGCAAGCC AGCCTTGGGT
CAGTACGGGG AACTGACCGT CGAACAGGCC CGCTCGCTGG CTCAGGAATG GCTGGCCCAG
GTGCGCCGGG GCGGCGACCC AGCCGCAGAC AAAGCGCAGG CGCGCAAAGC GCCCACGGTC
AAGGAACTTT GCACGAAGTT CATGGAGGAC TACTCCAAGC TGCGCAACAA GCCCAGCACC
CAGGAAGGCT ATCAGAGCGT CATCGACCGC AACATCGTCC CGATGATCGG GCGGATGAAG
GTTCAGGACG TGAAGCGCCC GGACGTGGCC GGGATGATGA AGAAGATGAC GCACAAGCCG
GCCGACGCGA ACCGCACGTT CAGCGTCATG CGCCGCATGT TCAATCTGGC CGAGGTGTGG
GGCTACCGGC CCGACGGCAC CAATCCGTGC CGGCATGTCC CGATGTTCCC CAACGGCAAG
GCCACCCACC TCATCAGCGA CGAGGACATG GGCAAACTGT TCCGCCATCT TGAGCATCTG
GAGGCCGAGG GGATGGAAAG CTACGTCATC CCGCTGGCGA TCCGGCTGCA ATTCGAGTTC
GCCGGTCGTC GTGGTGAAAT CGTCACGCTC CAATGGGATT GGGTGGACTT CGAGAACCGG
CGCGTCGTCT GGCCCGACAG CAAGACCGGC GGCATGTCCA AGCCCATGAG CGAAGAAGCC
TATCGGCTGC TTTCGACAGC ACCGCGCCGG GACGATTGCC CGTATGTGCT GCCATCCCCG
AACCGTCCCG GCCAGCACTT GACCACGGGC GAGTATTACA ACGGCTGGAG CCGTGCGCTC
AAGGCAGCGG GCGCGGCGCA TGTAGGTACG CACGGCATCC GCCACCGCTC TGCCACTGAC
ATTGCCAACT CGGGCATCCC GGTCAAGGTC GGCATGGCGC TGACCGCGCA CAAGACCGTG
GCGATGTTCA TGCGCTACGT CCACACCGAG GATGACCCGG TGCGCAAGGC GGCCGAACTG
GTGGCGAACC GGCGCAAGAC GATCACCGGC GCCAAGCGGC TCCCTGCGGA GGCAACTGCA
TGA
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| Protein sequence | MAKIKLTKSA VDAAQPQAQA VELRDTLVPG FLCKVTPSGR KVFMLQYRTN AGERRKPALG
QYGELTVEQA RSLAQEWLAQ VRRGGDPAAD KAQARKAPTV KELCTKFMED YSKLRNKPST
QEGYQSVIDR NIVPMIGRMK VQDVKRPDVA GMMKKMTHKP ADANRTFSVM RRMFNLAEVW
GYRPDGTNPC RHVPMFPNGK ATHLISDEDM GKLFRHLEHL EAEGMESYVI PLAIRLQFEF
AGRRGEIVTL QWDWVDFENR RVVWPDSKTG GMSKPMSEEA YRLLSTAPRR DDCPYVLPSP
NRPGQHLTTG EYYNGWSRAL KAAGAAHVGT HGIRHRSATD IANSGIPVKV GMALTAHKTV
AMFMRYVHTE DDPVRKAAEL VANRRKTITG AKRLPAEATA
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