Gene RSc2618 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc2618 
Symbol 
ID1221465 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp2818983 
End bp2819813 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content63% 
IMG OID637239019 
Producthomologue to gene 32 protein of F plasmid 
Protein accessionNP_520739 
Protein GI17547337 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACTCG CATCCCGTTT CGCTTCCCGT TCCCCCTCGC TGCGTAGCGA TTACCCGCTG 
ACCGATGACC AGATTCACCG CGTGGCTCCG TCCATCTTCG CGGACGCGCC GCATGAAAGC
CGTTCGCAGC GGTACGCCTA CATCCCCACC GCCGCCGTGC TGGCCGAACT GCGCAAGGAG
GGGTTTCAAC CCTTCATGGT GACGCAAACC CGCGTGCGCG ACGAAGGCAA GCGCGAGCAC
ACCAAACACA TGCTGCGCCT GCGCCACGCA AGCCAGATCA ACGGCGCGGA AGCCAATGAA
ATCGTGTTGC TCAATTCCCA TGACGGGACG AGCAGTTATC AGATGCTGGC CGGAATGTTC
CGGTTCGTGT GCAGCAATGG CCTTGTATGC GGCGACACCG TGGCCGATGT GCGCGTGCCC
CACAAGGGCG ACGTTTCCGG GCATGTCATC GAAGGCGCTT ACGAAGTCTT GCGCGGCTTC
GACCGGGTGA AGGATTCCCG CGATGCCATG CGCGCTATCA CGCTGGACGA AGGCGAAGCC
AAAGTGTTCG CCCGTTCCGC GCTGGCCTTG AAGTACGACC CCACCGACAA CAGACCCGCG
CCCATCACGG AAAGCCAAAT CCTGATGCCG CGCCGGTTCG ACGACCGTCG CCCGGACTTG
TGGAGCGTGT TCAACCGCAC CCAAGAGAAC CTGACCAAAG GCGGATTGCA TGGCCGCAGC
GTCAACGGAC GCCGCCAGCA AACCCGCCCG GTGCAGGGCA TTGATTCCGA TGTGCGCCTC
AATCGCGCCC TCTGGATGCT GGCCGATGGC CTGCGCCAGT TGAAAGCCTG A
 
Protein sequence
MQLASRFASR SPSLRSDYPL TDDQIHRVAP SIFADAPHES RSQRYAYIPT AAVLAELRKE 
GFQPFMVTQT RVRDEGKREH TKHMLRLRHA SQINGAEANE IVLLNSHDGT SSYQMLAGMF
RFVCSNGLVC GDTVADVRVP HKGDVSGHVI EGAYEVLRGF DRVKDSRDAM RAITLDEGEA
KVFARSALAL KYDPTDNRPA PITESQILMP RRFDDRRPDL WSVFNRTQEN LTKGGLHGRS
VNGRRQQTRP VQGIDSDVRL NRALWMLADG LRQLKA