| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2601 |
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| Symbol | |
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| ID | 1221448 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 2804432 |
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| End bp | 2806483 |
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| Gene Length | 2052 bp |
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| Protein Length | 683 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637239002 |
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| Product | hypothetical protein |
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| Protein accession | NP_520722 |
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| Protein GI | 17547320 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3843] Type IV secretory pathway, VirD2 components (relaxase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCGT GCTTTGCACG ACCGGACACG CCAGAGCTTG CAGGGAGCGC GGCCATGACC
GACCGCCGCG ACGACGATTT CCGCGTGCGT CCCAGCGCCC CGAAGAATCG GGGCAAGGGC
CAGGGCCAGA GCTTCGTTTC CAAGGTGCTC AAGCAGGCTG GCAAGGCCAG CGGCGGCAAG
TCCTCGATGC GCCATTCCGC CGCGTCCGGC GGCCAGGGCC AGCGCGCCGG CCAGCGGCCC
GGCTCGCGCC TGGGGCGCGG CCATACGGCG GCGCGTTTCG CCGGGGCGAA GCTGACGCCT
ATGTCGCGGC GCGTGACGAT CAAGACCTTG CTGGTCAATC AACGCAATGC CAGCCCGCAG
TCGCTAGCCA AGCATCTGCG CTACATCGAG CGCGACGGCG CGGGCCGCGA TGGCGAACCT
GGGCGGGCCT ACGGGCCGCA GACCGACGAA GCCGACCTTG ATGCCTTCAA GGAGCGGGCC
GCCGACGACC GGCACCATTT CCGCTTCATC GTTTCGCCCG AGGACGGGGC CGAGCTGGAC
GACCTGCGCA CCTACACCCG GCATCTGGTG AACCGGATGG AAGCCGACCT GGGGACGCGG
CTGGACTGGG TGGCGGTCGA TCATTGGAAT ACCGACAACC CGCACACACA CCTGATCGTG
CGCGGGCGCG ACGACACCGG CAAAGACCTC ATCATCGCCG GCGACTACAT CGCCCACGGC
TTCCGCCATC GGGCCGCCGA ACTGGCGACG GAATGGCTGG GGCCACGCAC CGAACTGGAG
ATCCAGCAGA CCTTGCAGCG CGAGGTGGAG CAAGAGCGGT GGACGAGCCT CGACCGCACG
CTGCAACGCG AGGCCGGCGA AGATGGCCGG GTGCAGATCG AACGCTTCAA CGAACCCCGG
CTGCAACGCC AGCGCCTGCT GCTGATCGGC CGCCTGCAAC GCTTGCAGCG CTTGGGCCTG
GCCGACGAGA CGCAGCCCGG CGCCTGGGCC GTCCATGCGG ACGCGGAGAA GACCTTGCGT
GCCTTGGGCG AGCGTGGCGA CATCATCCGC ACGATGCAGC GGGCCATGAG CGGCCAGCCG
CGCGAGCTGG CGGTATTCGA GCCAGGCGAT GACGGCCGCA CCATCGTCGG CCGTTTGGCC
GCGAAGGGGC TGGCCGACGA GCTGCACGAC CGCGGCTATC TGGTCATCGA CGGCGTGGAC
GGTAAGGCCC ACTACGTCGC GCTGAACGCC CGCGACGAGT TGGCGAACTA TCCCACCGGA
GCCGTGGTGG AGGTGCGTGG TTCCGCCGAG GTGCGCGCGG CCGACAAGAA CATCACCGCG
CTGGCGAGCG ATGGTCTGTA CCGCACCAAT CATCACCTGG CGATTGAGCA AGGCCGAGCC
AAGCCCGGCC GCGACCCGCA GGAAGTCATC GCGGCCCACG TCCGCCGGCT GGAAGCCCTG
CGCCGTGCAG GTATCGTGGA GCGCGTGGCC GATGGCTTGT GGAAGGTGCC GAACGACCTG
GCCGAGCGTG GCCGCCAGTA CGACGCGCAG CGCCTAGGTG GCGTGGCCGT GGAAATGAAA
TCGCATCTGC CCATCGAGCG ACAGGCCCGC TTCATAGGCG CGACGTGGCT TGACCAGCAG
TTGATCGGCG GCGGCCGGGG GCTGGGCGAC CTGGGCTTTG GCGGCGACGC TAAGCAGGCC
ATGCAGCAAC GGGCGGACTT CTTGGCCGAA CAGGGGCTGG CCGAGCAGCG GGGACAGCGA
GTGATCCTCG CGCGCAACCT GCTGGGCACG CTGCGTAACC GAGAGTTGGT GCATGCCGCC
AAGGACATTG CCGCCGACAC CGGCCTGGAG CATCGACCCG TAGGGGACGG TCAGCGTGTG
GCCGGCATCT ACCGGCGTTC GATCATGCTA GCGAGTGGGC GGTACGCGAT GCTGGACGAC
GGCAAGGGAT TCAGCCTGTT GCCGTGGCGT CCGGTGATCG AACAACGGCT GGGGCAGCAG
ATCGCCGCGA CGGTGCGCGG CGGCGGGGTG TCGTGGGAGG TAGGGCGCGC CAGAGGGCCG
TCAGTCGGCT GA
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| Protein sequence | MSACFARPDT PELAGSAAMT DRRDDDFRVR PSAPKNRGKG QGQSFVSKVL KQAGKASGGK
SSMRHSAASG GQGQRAGQRP GSRLGRGHTA ARFAGAKLTP MSRRVTIKTL LVNQRNASPQ
SLAKHLRYIE RDGAGRDGEP GRAYGPQTDE ADLDAFKERA ADDRHHFRFI VSPEDGAELD
DLRTYTRHLV NRMEADLGTR LDWVAVDHWN TDNPHTHLIV RGRDDTGKDL IIAGDYIAHG
FRHRAAELAT EWLGPRTELE IQQTLQREVE QERWTSLDRT LQREAGEDGR VQIERFNEPR
LQRQRLLLIG RLQRLQRLGL ADETQPGAWA VHADAEKTLR ALGERGDIIR TMQRAMSGQP
RELAVFEPGD DGRTIVGRLA AKGLADELHD RGYLVIDGVD GKAHYVALNA RDELANYPTG
AVVEVRGSAE VRAADKNITA LASDGLYRTN HHLAIEQGRA KPGRDPQEVI AAHVRRLEAL
RRAGIVERVA DGLWKVPNDL AERGRQYDAQ RLGGVAVEMK SHLPIERQAR FIGATWLDQQ
LIGGGRGLGD LGFGGDAKQA MQQRADFLAE QGLAEQRGQR VILARNLLGT LRNRELVHAA
KDIAADTGLE HRPVGDGQRV AGIYRRSIML ASGRYAMLDD GKGFSLLPWR PVIEQRLGQQ
IAATVRGGGV SWEVGRARGP SVG
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