Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2594 |
Symbol | |
ID | 1221441 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 2799637 |
End bp | 2800311 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637238995 |
Product | glutathione-S-transferase protein |
Protein accession | NP_520715 |
Protein GI | 17547313 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0625] Glutathione S-transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.445023 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGGACA GTACGCTCAC CCTTATCAGC CATCCGCTTT GCCCGTTCGT GCAGCGGGCC GCAATCGTCT TACTGGAAAA AGGCGTGCCC TTTGAGAGGA TCAACGTCGA TCTCGCTGCC AAGCCGGACT GGTTTCTGGC ACTTTCACCG ACAGGAAAAG TGCCCTTGCT GAAGGTGGTG CGGGCAGACC GCGAGGACGC CGTTCTCTTT GAAAGCATGG TGATCTGCGA GTACCTCGAA GAGACGCAGG CCGGTGGCAA GCTCTACGCC GAGGACGCGC TGTCGCGCGC ACAGCAGCGA GCGTGGATCG AGTTCGGCAC GGCCACCCTC GCCGACGCTT GGCAATTTCT CAACGCGAGT GACCGCACGA CGTCGGACGA CAAGCGCGCG GCGTTCCGGA AAAAGCTGCA GCAACTGGAG AAAGCCGTCG CGGCGGAGCC GTATTTCAGC GGCAGCACCT TCAGCATGGT CGATGCCGTG TACGCGCCTC TGTTTCGTTA TTTCGACATC CTCGATCCGA AGGTATCGCA ACCGATCTTC GAGGGCCTGC CCCGCGTCAA GGCATGGAGG GCGGCGCTGG GTGCCCGGGA GAGCGTCATC GCCGCAGTGG GAGAAGACTA TGCGGAGAGA TTCGGGCAGC ACCTTCGTCT GCACCAGGCG CTACTGGCAA ACTAA
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Protein sequence | MPDSTLTLIS HPLCPFVQRA AIVLLEKGVP FERINVDLAA KPDWFLALSP TGKVPLLKVV RADREDAVLF ESMVICEYLE ETQAGGKLYA EDALSRAQQR AWIEFGTATL ADAWQFLNAS DRTTSDDKRA AFRKKLQQLE KAVAAEPYFS GSTFSMVDAV YAPLFRYFDI LDPKVSQPIF EGLPRVKAWR AALGARESVI AAVGEDYAER FGQHLRLHQA LLAN
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