Gene RSc2589 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc2589 
Symbol 
ID1221436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp2795654 
End bp2796046 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content57% 
IMG OID637238990 
Producthypothetical protein 
Protein accessionNP_520710 
Protein GI17547308 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG4308] Limonene-1,2-epoxide hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.744125 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAACGC CTATCGAAAT CGTCACTGCC TTCTGCGCTA CTTTCCCAGA GGATGATGGG 
AAGGCTGCCA TCAGGCGATA TTTCACGCCG GACACGGTTT GGATCAATGA AGGGATTTCC
AAAACTACGG GCATCGAAGA AGCAATCGCC TTCCTCGGGC GACCGAACAG ATCGCCAAGC
ATCGCGGCCG TGCACTTCGA CATTCTTGCC ATCGCCGCGG ATGGAAATCG CGTACTGACT
GAGCGACTGG ATCGCTTTGT ACGCGCCGAC GGCAGCGAGA TCGCCGCGAT CAGGGTAATG
GGCATATTTG AAGTGGAAGG CGACCGTATC GTGGCTTGGC GTGACTATGC CGACGTCAAC
GCCGGGAGGA AGATCACCCC CGACAAGCGC TGA
 
Protein sequence
MSTPIEIVTA FCATFPEDDG KAAIRRYFTP DTVWINEGIS KTTGIEEAIA FLGRPNRSPS 
IAAVHFDILA IAADGNRVLT ERLDRFVRAD GSEIAAIRVM GIFEVEGDRI VAWRDYADVN
AGRKITPDKR