| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2588 |
|---|
| Symbol | |
|---|
| ID | 1221435 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | - |
|---|
| Start bp | 2794552 |
|---|
| End bp | 2795496 |
|---|
| Gene Length | 945 bp |
|---|
| Protein Length | 314 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637238989 |
|---|
| Product | transcription regulator protein |
|---|
| Protein accession | NP_520709 |
|---|
| Protein GI | 17547307 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGATTA GGCATCTGCG TTGTTTTCTT GCGGTCGCCG AAGAACTCCA CTTCGCCCGC
GCAGCGGAGA AGCTGCATAT CGAGCAATCG CCGCTGTCGC GCACCATCAA AGAACTGGAA
GAAGACCTAG GCGAACAGTT GTTCATCCGC ACCAGCCGCA GCACACGACT GACGCGGGCG
GGAAAACTGT TCCTTGAGCA TGTGCCACGT GTGTTCACTG CCTTGCAACA AGCGCGCGAC
AGCGTGAGGG CCGCAAGCAA TGGATTCCAC GGTCAGTTGC GCATCGCACT GTCCGACGGC
ATCACGCCGT CGCGCCTGCC AGCTTTGCTG GCGATGTGCA GGCAGGAGGA ACCCGAGGTC
GATATCCGTC TGTTCGAGGT GCCGCTGTCG CAACAGATCA AGGGACTGCA TGACGACCTG
TACGACGTGG GTTTCGCCCA GTCCGATGAG GTAGGCGAAT GCATCGCAGC CGAAGCGGTG
TGGAGCGATC CGCTGATGGT GGCCGTGCCA GCGCGCCATC CCCTGCTCAA GCACAAGCGC
ATTCCCTTGG AAGAAATGCT GCGTTACCCG CTGGTGCTGT GCGATCCACT GGCGTGCGAA
GGGCATGCAC GCCAGGTAGA GCGGGTGCTG CGCCGCTCGG ACATGGAGCC GCTGATTGCC
GAGCGCGTGG CCTCCTGCGA TTTGATGATG GCGCTCGTGT CAGCAGGCTT CGCGCTGGGG
CTGACCGGCG CACCCCACAT CGTGACCAGC CGCGAGCCCG GTGTGGTCGC GCGACCCTTG
GCGGGCCGCT CCCCCGTGCT GACAACCTAT CTGTTGCATC GGGAGGGCGA GTCTTCGGCA
GTGCTGTCCC GGTTCATCGA ACGGGTGCAG GCCATCGACT TGCCCGAAGG CGCACGACCC
GCGCTGCCAT CTGAAGCCGC GCCCCCGGAG GACACCGAGC CATGA
|
|---|
| Protein sequence | MEIRHLRCFL AVAEELHFAR AAEKLHIEQS PLSRTIKELE EDLGEQLFIR TSRSTRLTRA
GKLFLEHVPR VFTALQQARD SVRAASNGFH GQLRIALSDG ITPSRLPALL AMCRQEEPEV
DIRLFEVPLS QQIKGLHDDL YDVGFAQSDE VGECIAAEAV WSDPLMVAVP ARHPLLKHKR
IPLEEMLRYP LVLCDPLACE GHARQVERVL RRSDMEPLIA ERVASCDLMM ALVSAGFALG
LTGAPHIVTS REPGVVARPL AGRSPVLTTY LLHREGESSA VLSRFIERVQ AIDLPEGARP
ALPSEAAPPE DTEP
|
|---|
| |