| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2584 |
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| Symbol | trbB |
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| ID | 1221431 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 2790492 |
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| End bp | 2791559 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637238985 |
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| Product | conjugal transfer protein TrbB |
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| Protein accession | NP_520705 |
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| Protein GI | 17547303 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | [TIGR02782] P-type conjugative transfer ATPase TrbB |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCCG TTCCGCAAAC CCCGCCCGAA CGATCTTCCA CCGCGGCTTC GCTGGATCGC
CGCATCCAGA TGCTGCGCAC GGCTATGGGG CCGGTCATCG CCGCTGCGCT GGCCGACCCG
GACGTGGTGG AAATCATGCT CAACCCCGAC CGCACCCTAT GGGTGGATCG GCTGTCCTCG
GGCCGCACGC CGCTGGGCGT CGAACTGCCC GAGGCCGATG GCGAACGCAT CATCCGCCTG
GTCGCCGCCC ATGTCGGTGC GGAGGTGCAT CGCGGCCAAC CGCTCTTGAC CGCCGAGCTG
CCGGAAACCG GCGAACGCTT CGAGGGCATC TTGCCGCCGG CTGCACCGGG GCCGGCCTTC
GCGCTGCGCA AGCGCGCCGT GAGCATCATT GGCCTGGATC GCTACGTCAG CGACGGCATC
CTGACCACCG GGCAGGCGGA CTTCCTGCGC CGCGCCGTGC GCGAGCGCCA GAACATCCTG
ATCGCCGGGG CAACGAGCAG CGGCAAGACC ACGCTCGCCA ATGCCTTGCT TGCGGAAATC
GCCGCCACGG GCGACCGCGT GCTGGTGCTC GAAGACACCA TCGAGCTGCA ATGCGCCGCC
CGCGACCATG TGCCGCTGCG CACCCGCGCC GGCGTCGTGT CCATGACCGA GTTGGTGCGC
GCCACGATGC GTCTGCGCCC CGACCGCGTG ATCGTCGGCG AGGTGCGCGG CGGCGAAGCC
CTGGACTTGG TGAAGGTGTG GGGCACTGGC CATCCCGGCG GCATCGCCAC CATCCACGCC
GGTTCCGCGC TGGGTGCGCT GCTGCGCCTG GAACAGTTGA TTCTTGAAGT GGCGGTGAAT
CCGCCGCGTG CGCTGATCGC CGAGGCGGTC AACGTCGTGA TCCACATCGC CGGACGCGGC
CGCAAGCGCC GCGTCGAAAG CATCGCCCGC GTCGTCGGCT TCGACGGTGT GGGCTACCGC
CTGGCGGACG CGCTGGAAAC GCCGTTTCCC GAGCTGACGC CGGTTCCTCT TGCAGCCAAT
GCCGCTGCGC CTTCCCCGTC CCTTGACCAA CCTGGAGAAC TGCCGTGA
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| Protein sequence | MSAVPQTPPE RSSTAASLDR RIQMLRTAMG PVIAAALADP DVVEIMLNPD RTLWVDRLSS
GRTPLGVELP EADGERIIRL VAAHVGAEVH RGQPLLTAEL PETGERFEGI LPPAAPGPAF
ALRKRAVSII GLDRYVSDGI LTTGQADFLR RAVRERQNIL IAGATSSGKT TLANALLAEI
AATGDRVLVL EDTIELQCAA RDHVPLRTRA GVVSMTELVR ATMRLRPDRV IVGEVRGGEA
LDLVKVWGTG HPGGIATIHA GSALGALLRL EQLILEVAVN PPRALIAEAV NVVIHIAGRG
RKRRVESIAR VVGFDGVGYR LADALETPFP ELTPVPLAAN AAAPSPSLDQ PGELP
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