| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2580 |
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| Symbol | trbJ |
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| ID | 1221427 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 2786637 |
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| End bp | 2787374 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637238981 |
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| Product | conjugal transfer protein TrbJ |
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| Protein accession | NP_520701 |
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| Protein GI | 17547299 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5314] Conjugal transfer/entry exclusion protein |
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| TIGRFAM ID | [TIGR02780] P-type conjugative transfer protein TrbJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACCC GTGTGCTTTC CGTTTCGCTC GCCGCCGTGC TGTCGGTGTC GCTGCTGGCC
GTGCAGCCCG CATCGGCGCT GACGGTGTTC GACCCGTCCA ACTTCGTGCA GAACACGCTG
ACCGCCGTTC GCACGCTGGA GCAGATCAAC AACCAGATCA ATCAGCTCCA AAACGAAGCG
CAGATGCTGA TGAACCAGGC GCGCAACCTG ACGAAGCTGG ACTTCAACAT CGTCAACCGG
CTGCGCTCGA CGCTCGCCAC GACCGAACGC CTGATCGCCG AGGCGCAAGG GCTGGCCTAT
GACGTGCAGA GCATGGATGC CACGTTCTCG CGCCTGTACC CGGAGCAGTA CGCCGCCACC
ATCAGCGGCG ACCAGATGCT GCGCGATGCG CAGGAACGCT GGAAAAACAC GCTGAACGGC
CTGCACACCG CGATGCGGAT GCAGGCGCAG GTTTCCCAGA ACCTGGCGCA AGACGAAAGC
GCGCTGGCCG ACCTCGTGAG CCAGAGTCAA TCGGCCACCG GCGCGCTGCA AGCCATGCAG
GCCACCAATC AACTGCTGGC GCTCCAGGCC AAACAGTCGA TTCAGGCCCA GCAGCTCCAG
ATCACGCAAG ACCGGGCGGC CTCGCTGGAA CTGGCGCGGC AGGCGGCGGC CACCGAGCGC
GCCCGCGAAG TGCGGCGGCG CTTCCTGGGC ACCGGCACGC CGTACACGCC GCAGTCCGTC
AATTTCTACA ACAACTGA
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| Protein sequence | MKTRVLSVSL AAVLSVSLLA VQPASALTVF DPSNFVQNTL TAVRTLEQIN NQINQLQNEA
QMLMNQARNL TKLDFNIVNR LRSTLATTER LIAEAQGLAY DVQSMDATFS RLYPEQYAAT
ISGDQMLRDA QERWKNTLNG LHTAMRMQAQ VSQNLAQDES ALADLVSQSQ SATGALQAMQ
ATNQLLALQA KQSIQAQQLQ ITQDRAASLE LARQAAATER AREVRRRFLG TGTPYTPQSV
NFYNN
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