| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2578 |
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| Symbol | trbL |
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| ID | 1221425 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 2784928 |
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| End bp | 2786301 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637238979 |
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| Product | conjugal transfer protein TrbL |
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| Protein accession | NP_520699 |
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| Protein GI | 17547297 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3846] Type IV secretory pathway, TrbL components |
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| TIGRFAM ID | [TIGR02783] P-type conjugative transfer protein TrbL |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGACG TGACCATCAT CGACAGATTC CTCGATACGT TCTCGCGCTA TATCGACTCC
GGTTTCGGGC TATTGCAAGG CGAAGTCGCG TTCCTGACGG CCACGCTTAT CGCCATCGAC
ATGACCATCG CCGGCCTGTA TTGGGCCATG AGCCATGCGA CCGGCCAGAG CGAAGACGTG
ATCGCCAAGC TGCTGCGCAA GGTGCTCTAC GTCGGTGCCT TCGCCTACAT CATCGGCAAC
TTCAACTGGC TCTCGGGCAT CGTGTTCCGG TCGTTTGCTG GGCTAGGTAT CACCGCCACC
GGCTCCGCTA TCACGATGGA GAACTTCTTG CAGCCGGGCC GCCTGGCGAA GACCGGCATC
GACGCGGCCG CGCCGATCCT CGACCAGATC GGCGACATGG CCGGCTTCCC CGAAGTGTTC
GTGAACCTTG ACCCCATCGT GGTGCTGTTC ATCGCCTGGC TGGTGGTGAT CCTCTGCTTC
TTCGTGCTCG CGGTACAGCT TTTCATCACG CTGATCGAGT TCAAGCTGAC CACGCTTGCC
GGGTTCGTCC TGATCCCGTT TGCGCTCTGG AACAAGACCT CGTTCCTCGC GGAAAAGGTG
CTCGGCAACG TGGTTTCGTC GGGCATCAAG GTCTTGGTGC TGGCCGTCAT CGTCGGCATC
GGCTCGGGCC TGTTCGCGGA GTTCCAGGTT CATCCCGACG AGCCTTCCAT CGACCACGCG
CTGGTCGTGA TGCTGGCCTC GCTCGCGCTG CTGGCGCTGG GCATCTTCGG CCCCGGCATC
GCCACGGGCC TCGTGTCCGG TGCGCCGCAG CTCGGCGCGG GCGCGATGGC CGGCGCTGCT
GTCGGTGCTG TCGGCACGGG AGTTGCCATC GGTGCCGCCG CGACTGGCGT AGGCGGTGCC
GTTATGGCGG GCGCGCGCAT GGCCCCGGCC GCCGCCAAGC TGGCCGGCAG CGGCGCACGC
GCCGCGACGT CGGCGGCCAG CAGCGCCAAG TCCGCATTCC AGGCCGGTTC CGCCGCTGCG
GGCGGCGGGG CCAAGGGCGC GGCCGCTGGC CTCGGCAACG TCGCCAAGAC CGGTGCGCAG
GCCGCAGGCC GCCGCGCCGC ATCGCGTGTG TCCGCTGCCG GGCAGAAGAT GGCCGGTTCC
TTCCGTGCTG GCTGGAACGG CGCGGATGCC GGCGCTGCCG GTTCCGACCA GGCGGCCGCA
GGCGAAAGCG CGGACAGCGC CGCCAGCGCA CCAAAGCAGG AGCAACCCGC CTGGGCCAAG
CAGATGCACC GCCGCCAACA GATCACCCAC GCCGCGACCA CCGCTGCCCA CACGCTGCGC
GGTGGCGATG GTGGCGGCTC GGGGCAAGGC CCGAGCCTGC GCCCCGATGA GTGA
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| Protein sequence | MNDVTIIDRF LDTFSRYIDS GFGLLQGEVA FLTATLIAID MTIAGLYWAM SHATGQSEDV
IAKLLRKVLY VGAFAYIIGN FNWLSGIVFR SFAGLGITAT GSAITMENFL QPGRLAKTGI
DAAAPILDQI GDMAGFPEVF VNLDPIVVLF IAWLVVILCF FVLAVQLFIT LIEFKLTTLA
GFVLIPFALW NKTSFLAEKV LGNVVSSGIK VLVLAVIVGI GSGLFAEFQV HPDEPSIDHA
LVVMLASLAL LALGIFGPGI ATGLVSGAPQ LGAGAMAGAA VGAVGTGVAI GAAATGVGGA
VMAGARMAPA AAKLAGSGAR AATSAASSAK SAFQAGSAAA GGGAKGAAAG LGNVAKTGAQ
AAGRRAASRV SAAGQKMAGS FRAGWNGADA GAAGSDQAAA GESADSAASA PKQEQPAWAK
QMHRRQQITH AATTAAHTLR GGDGGGSGQG PSLRPDE
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