| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2577 |
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| Symbol | trbF |
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| ID | 1221424 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 2784193 |
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| End bp | 2784897 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637238978 |
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| Product | conjugal transfer protein TrbF |
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| Protein accession | NP_520698 |
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| Protein GI | 17547296 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3701] Type IV secretory pathway, TrbF components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.756433 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGATTCA AACGCCCGCA GGTGCGCTAT GCCGATACGC CGCAACCCGC CACTCCGTAC
CAATCCGCCG CGCAGGTGTG GGACGACCGC ATCGGCTCGG CCCGCGTCCA GGCCAAGAAC
TGGCGATTCA TGGCTTTCGG CTGCCTCACG CTTGTGCTGC TGATGGCTGG CGGCCTGGTG
TGGCGTTCGG CGCAATCCAT CGTCACGCCC TATGTCATCG AGGTCGATCA GTCCGGGCAG
GTGCGCGCCG TCGGCGAAGC CGCCACGCCG TACCGGCCCG CCGATGCGCA GATCGCGCAC
CATCTGGCGC GCTTCGTGAC GCTGGTGCGC TCGCTGTCCA TCGACCCCAT CGTGGTGCGG
CAGAACTGGC TGGATGCCTA CGACTACACC ACCGACAAGG GCGCGGCGGT GCTCAACGAT
TACGCCAGCA AGAACGACCC CTTCGCTCGC ATCGGCAAGG AGTCGGTGAC GGTTCAGATC
ACCAGCGTTG TCCGCGCCAG CGACACGTCT TTCAACGTGC GCTGGACAGA GCAGCGCTTC
GTCAACGGCG CACCCGCTGG CACCGAACGC TGGAACGCCG TGCTTTCCAC TGTCCTGCAA
ACCCCGCGCA CCGAACAGCG CCTGCGCAAG AACCCGCTGG GTATCTATGT CAACGGCCTG
TCGTGGAGCC GCGAATTGGA TTCTTCCGAA GGAGCCAAGC CATGA
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| Protein sequence | MRFKRPQVRY ADTPQPATPY QSAAQVWDDR IGSARVQAKN WRFMAFGCLT LVLLMAGGLV
WRSAQSIVTP YVIEVDQSGQ VRAVGEAATP YRPADAQIAH HLARFVTLVR SLSIDPIVVR
QNWLDAYDYT TDKGAAVLND YASKNDPFAR IGKESVTVQI TSVVRASDTS FNVRWTEQRF
VNGAPAGTER WNAVLSTVLQ TPRTEQRLRK NPLGIYVNGL SWSRELDSSE GAKP
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