| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2575 |
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| Symbol | trbI |
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| ID | 1221422 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 2781912 |
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| End bp | 2783189 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637238976 |
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| Product | conjugal transfer TrbI transmembrane protein |
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| Protein accession | NP_520696 |
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| Protein GI | 17547294 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2948] Type IV secretory pathway, VirB10 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAGG ACGACACTCC CGACCTTGCC GCGCCGCAGG CGGGCAAGGT AGCGCCCGAG
GCGGTGGCGC TTCGCGCCCA GCCGCGCCCG GTCACGCGCC TGAACCGGCG CACGCTGGCC
ATCCTCGCAG GTACCCTGTC GGTCGCCGTG CTTGGCGCGC TGATGTGGTC ACTGCAACCG
CAGCGGCGCG GCGCAGGCGA GCAGACCGAG CTTTACAACG TCGAACGCGT CTCGAAGTCA
GAAGGGCTGG ACGCGCTGCC GGCGGACTAC TCGAAGTTGC CGCCCCCTTT GCCGGCATCC
GTGCCGGAGC TGGGGCCGCC GCTGCCTGGC GATCTTGGAC CGGCCATCGT GAAGTCGCAT
CAGCCGATGA CGGCCGCCTA TGCGGCCCCC GGCCACGACC CCAACGATGC GCTGCGCAAG
GAAGCCGAAG CGGCGGCGGC ATCGTCGGTG TTCTTCCGCT TAGGGTCGCA GGCCGCGCCG
GTGGCGCAGA CGCAGGTGGC CGCCGCGCCG GACTTCGCCG CTAATGCGGC GTTCGACCGA
CTCGCGGCTG GCCCGGCCTC GACGGCCGCC CAGCCTGCCG ACCCGACCGC CGTACAGAAC
CTGCAAGACC AGAAAGAGGC TTTCCAGAAA GCCGGAAACA CGGAAACCCG TAATTCCGGC
AATCTGACCC TGCCGGCTTC GCCGTATCAG GTCATGGCCG GAACGGTGGT CGCAGGTGCC
TTGGTGACGG GCATCAAGTC GGACTTGCCG GGCGACGTGA TCGCCACGGT GACGGAGCCG
GTCTATGACA CGGCCACCGG GCGCTTCCTG CTGATTCCGC AGGGTTCGCG CATCCTGGGC
AAATACAACA GCCAGGTCAG CTACGGGCAG AGCCGCGTGC AGGTGGTGTG GAACCGGATC
ATCCTGCCGG ATACGTCTTC GCTCACACTC GACAACCTGG CCGGCACCGA CCCTGCCGGC
TATGCCGGGC TGGAAGACGA CGTGGACTAC CACTGGGGCC GCATCTTCGC CGGGGCGGCG
TTGACGACGC TGCTGGGTGT CGGTGCCGAG CTGGCCGCGC CGGAGAACCG ACAGGACGGC
AACCGCATCG TCATCGCCGG GCGCGACAGC GCGCAGGACA GCATCAATCA GGTCGGTCAG
GAGATGACCC GGCGCAACAT GAACATCCAG CCGACGCTGA CCGAACGGCC GGGCCTGCCG
GTTCGCATCA TCGTCAACCG CGATCTGGTG CTGCGGCCCT ACCAGCCGCT TTTCTTCAAC
AGGGGGACTT CACGATGA
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| Protein sequence | MSQDDTPDLA APQAGKVAPE AVALRAQPRP VTRLNRRTLA ILAGTLSVAV LGALMWSLQP
QRRGAGEQTE LYNVERVSKS EGLDALPADY SKLPPPLPAS VPELGPPLPG DLGPAIVKSH
QPMTAAYAAP GHDPNDALRK EAEAAAASSV FFRLGSQAAP VAQTQVAAAP DFAANAAFDR
LAAGPASTAA QPADPTAVQN LQDQKEAFQK AGNTETRNSG NLTLPASPYQ VMAGTVVAGA
LVTGIKSDLP GDVIATVTEP VYDTATGRFL LIPQGSRILG KYNSQVSYGQ SRVQVVWNRI
ILPDTSSLTL DNLAGTDPAG YAGLEDDVDY HWGRIFAGAA LTTLLGVGAE LAAPENRQDG
NRIVIAGRDS AQDSINQVGQ EMTRRNMNIQ PTLTERPGLP VRIIVNRDLV LRPYQPLFFN
RGTSR
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