Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2573 |
Symbol | tISRso15 |
ID | 1221420 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 2780153 |
End bp | 2781373 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637238974 |
Product | ISRSO15-transposase protein |
Protein accession | NP_520694 |
Protein GI | 17547292 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3464] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGGATC GCAAGACACT GCAAGCGCTG GGCTGCTGGA AGGGTTACCG CCTGGAGCGC GTGGAGTGGC CGCAAGGCGA GAGCCGCACG CTATCGCTCT ATCTGAAGCC AGTCAGCAAG GTCATGCACT GTGAGCAATG CGGAACGCGT TGCTCGCAGA TTCATGAGAC GACAGCTCGG CGGGTACGTG ATCTGCCGCT CTTCGAGTAC CGGGTGGTGC TGCACGTCCC ACGCCGGCGC GTGTGGTGCG AGCGTTGTGG CGGACCTCGG CTGGAGAAGC TGGACTGGCT GGGCCGCTAC CAGAGAGTGA CGCAGCGATT CGCCGAGGCC TGCGAGAAGC TGCTGCAGTC GAGCAGCGTA CAGGCGGTGG CCGCGTTCTA CGATCTGGGC TGGCACACGG TCAAATCGAT CGACAAGATG CGCTTGCGAG CGCGTGTGGT CGAACCGGAC TGGTCGACGA TCCGTTATCT GGCGATGGAC GAGTTCGCAC TCCATAAAGG CCATCGCTAT GCCACGGTGG TCGTTGATCC GATCGGCCGG CAGGTGCTCT GGATCGGGCC GGGGCGCTCG CGCGAGACTG CCCGCGCCTT CTTCGAACAG CTTCCGGAGG GCGTTGCCCA GCGCATCGAG GCGGTGGCAA TCGACATGAC GACCGCCTAC GAACTGGAGA TCAACGCGCA TTGCCCGCAG GCCGAGGTGG TCTACGACTT GTTCCACGTC GTGGCCAAGT ATGGGCGTGA GGTGATCGAC CGGGTGCGGG TGGATCAGGC CAATCAACTC CGGCATGACA AGCCGGCCCG GAAGGTTCTG AAGTCCAGCC GGTGGCTGTT GCTACGCAAG CGCCACAATC TGAAGCCAGA GCAGGCCGTG CACCTGAAGG AGCTGCTGGC CGCCAATCAG TCGCTGTTAT GCGTCTACGT GCTGCGCGAC GAGTTGAAAC GGCTCTGGTT TTACCGCAGA CCGGCCTGGG CGCAAAAGGC CTGGGAACAA TGGTTTGAGC AGGCTCGGCA AAGCGGGATC GCCGCTTTGC AACTGTTCGC CCAGCGCCTG GAGGGCTACT GGCATGGAAT TCTGGCCCGC TGCCGCCACC CGCTCAACAC CAGCGTCGTC GAAGGCATCA ACAACACCAT CAAGGTCATC AAACGTCGGG CTTACGGGTA CCGCGACGAG GAATACTTCT TCCTCAAGAT CCGCGCCGCG TTCCCCGGAA TTCCTCGATG A
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Protein sequence | MLDRKTLQAL GCWKGYRLER VEWPQGESRT LSLYLKPVSK VMHCEQCGTR CSQIHETTAR RVRDLPLFEY RVVLHVPRRR VWCERCGGPR LEKLDWLGRY QRVTQRFAEA CEKLLQSSSV QAVAAFYDLG WHTVKSIDKM RLRARVVEPD WSTIRYLAMD EFALHKGHRY ATVVVDPIGR QVLWIGPGRS RETARAFFEQ LPEGVAQRIE AVAIDMTTAY ELEINAHCPQ AEVVYDLFHV VAKYGREVID RVRVDQANQL RHDKPARKVL KSSRWLLLRK RHNLKPEQAV HLKELLAANQ SLLCVYVLRD ELKRLWFYRR PAWAQKAWEQ WFEQARQSGI AALQLFAQRL EGYWHGILAR CRHPLNTSVV EGINNTIKVI KRRAYGYRDE EYFFLKIRAA FPGIPR
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