| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2568 |
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| Symbol | alkB |
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| ID | 1221415 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 2776851 |
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| End bp | 2777507 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637238969 |
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| Product | alkylated DNA repair protein |
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| Protein accession | NP_520689 |
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| Protein GI | 17547287 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3145] Alkylated DNA repair protein |
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| TIGRFAM ID | [TIGR00568] DNA alkylation damage repair protein AlkB |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACCC GCGATCTCTT TGCCGACCAT GCCCCCGCTG ACGACCGCCG CATCGCGCTC
GGTGAAGCGG CGGTCGTGCT GCGCGGCTTT GCGCTGGCCG AGGCCACCGC GCTGCTCGCG
GCCATCGACG ACATCGCACG GCAGGCGCCG TTCCGCCACA TGGTCACGCC GGGCGGCTTC
GAGATGTCGG TCGCGCTCAC CAACTGCGGC GCGCTCGGCT GGACCTCCGA CCGCCGCGGC
TACCGCTATG CCGCGCGCGA CCCGCAGACC GGTCAGCCCT GGCCGCCGCT GCCCGACTGC
TTCCTGCGCC TGGCGCGCGA TGCCGCCGCC GCAGCCGGCT TCCCAGGCTT CACGCCCGAC
GCCTGCCTCA TCAACCGCTA CGTGCCCGGT GCGCGCCTGT CGCTGCACCA GGACAAGGAC
GAGCAGGATT ACGGCGCGCC CATCGTGTCG GTCTCGCTCG GCATGCCGGC CATGTTCTTG
TGGGGTGGCC ACCGGCGCAC CGACAAGACG CTGCGCGTGC CGCTCTTCCA CGGCGATGTG
GTGGTCTGGG GCGGACCGGA TCGCCTGCGC TACCACGGCG TCCTGCCGCT CAAGGAAGCC
GCGCATCCGC TGCTGGGCGC GCAGCGCATC AACCTGACCT TGCGCCGGGC CGGCTGA
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| Protein sequence | MTTRDLFADH APADDRRIAL GEAAVVLRGF ALAEATALLA AIDDIARQAP FRHMVTPGGF
EMSVALTNCG ALGWTSDRRG YRYAARDPQT GQPWPPLPDC FLRLARDAAA AAGFPGFTPD
ACLINRYVPG ARLSLHQDKD EQDYGAPIVS VSLGMPAMFL WGGHRRTDKT LRVPLFHGDV
VVWGGPDRLR YHGVLPLKEA AHPLLGAQRI NLTLRRAG
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