| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2564 |
|---|
| Symbol | miaA |
|---|
| ID | 1221411 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | + |
|---|
| Start bp | 2773981 |
|---|
| End bp | 2774952 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 637238965 |
|---|
| Product | tRNA delta(2)-isopentenylpyrophosphate transferase |
|---|
| Protein accession | NP_520685 |
|---|
| Protein GI | 17547283 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase |
|---|
| TIGRFAM ID | [TIGR00174] tRNA isopentenyltransferase (miaA) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCCG CCCCGCACAC CGCCCCGCGC GCCGTCTGCC TGCTCGGCCC GACCGCCTCC
GGCAAGACCG CCGCCGCGCT CGCGCTCGCC GAGCGCTGGC CGGTCGAGAT CATCAGCATG
GATTCCGCGC TGGTCTATCG CGACATGGAC ATCGGCACGG CCAAGCCGAG CCGGGCGGAG
CAGGCCATCG CGCCGCATCA CCTGATCGAC ATCATCGACC CGCTCGATGC GTATTCCGCC
GCGCAGTTCG CCACCGACGC GCAGGCGCTG ATCGAAGCCA TCCGCGCGCG CGGCAGGCTG
CCGCTGATCG TCGGCGGCAC GATGCTGTAT TACAAGGCGC TGACGCAGGG GCTGTCCGAC
CTGCCCGGCG CCGACCCGGC CATCCGCGCC GAGATCGACG CCGAGGCCGC GCGCGACGGC
TGGCCGGCGC TGCATGCGAA GCTCGCGCAG GTCGATCCCG TCACCGCGGC GCGGCTGCAT
GCCACCGATG CCCAGCGCAT CCAGCGCGCA CTGGAGCTGT ACCGGCTGAC CGGCCAGCCG
ATGTCCGCCC TGCTGGCGCG CGAGGCCGGT GCCGCCGCCT TCCACCGGCA CGAAGCCGCG
GCCGCCTACC TGAGCATCGC GCTGGAGCCC GCCGACCGCG CCGTGCTGCA CGCCCGCATC
GCACAGCGCT TCGATGCGAT GCTGGCCGGC GGCCTGCTCG ACGAGGTGGA GGCGCTGCGC
CGCCGGGGCG ATCTGTCGCC GGTACTGCCG TCCATCCGCT GCGTCGGCTA TCGCCAGGCG
TGGGCCTACC TCGACGGCGA GATCGACATG GCCACACTGC GCGAGCAGGG CATCGCCGCC
ACGCGCCAGC TCTGCAAGCG CCAGATCACA TGGCTGCGCA GCACGCCCGA GCGCCGCGTG
GTCGACTGCC TCGCCCCCGA CTACGTCGAC CAGGTGGCAC GCCTGGTCCG CAACGCACTC
GAAACGCCAT GA
|
|---|
| Protein sequence | MTAAPHTAPR AVCLLGPTAS GKTAAALALA ERWPVEIISM DSALVYRDMD IGTAKPSRAE
QAIAPHHLID IIDPLDAYSA AQFATDAQAL IEAIRARGRL PLIVGGTMLY YKALTQGLSD
LPGADPAIRA EIDAEAARDG WPALHAKLAQ VDPVTAARLH ATDAQRIQRA LELYRLTGQP
MSALLAREAG AAAFHRHEAA AAYLSIALEP ADRAVLHARI AQRFDAMLAG GLLDEVEALR
RRGDLSPVLP SIRCVGYRQA WAYLDGEIDM ATLREQGIAA TRQLCKRQIT WLRSTPERRV
VDCLAPDYVD QVARLVRNAL ETP
|
|---|
| |