Gene RSc2563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc2563 
SymbolmutL 
ID1221410 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp2772063 
End bp2773973 
Gene Length1911 bp 
Protein Length636 aa 
Translation table11 
GC content71% 
IMG OID637238964 
ProductDNA mismatch repair protein 
Protein accessionNP_520684 
Protein GI17547282 
COG category[L] Replication, recombination and repair 
COG ID[COG0323] DNA mismatch repair enzyme (predicted ATPase) 
TIGRFAM ID[TIGR00585] DNA mismatch repair protein MutL 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCCG CCACCCCTGC CCGCCGCCCC ATCCGTCCGC TTCCCGACCA GCTGATCAGC 
CAGATCGCGG CCGGCGAGGT GGTCGAACGC CCGGCCTCCG TGGTCAAGGA ACTGCTCGAG
AACGCACTCG ACGCCGGCGC CACTCAGCTG CAGATCAAGC TGGAAGAAGG CGGCGTGCGG
CGCATCGCCA TCACCGACAA CGGCGGAGGC ATTCCGGTCG ACGAACTGCC GGTCGCGCTG
ATGCGGCACG CGACCAGCAA GATCGGCTCG CTGGAGGAGC TGGAATCGGT GGCGACGCTG
GGGTTCCGCG GCGAGGCGCT GGCATCGATC GCCTCGGTGG CGGAGTTGAC GCTCACCTCG
CGCACCGCGC AAGACGCGCA CGCCACGCAA ATCATCGCGC AAACGGGGCG CGTGCAGCCG
GCCTCGGGCG GCGTCGGCAC CACGGTCGAC GTGCAGCACC TGTACTTCAA CACGCCGGCG
CGCCGCAAAT TCCTCAAGAC CGAACAGACC GAACTGGGCC ACTGCCTGGA GGTGATCCGC
CGCACCGCAC TGGCGCGCCC GGACGTGGCC ATCTCCGTGC ATCACAACGG CAAGCCGCTG
GAGCACTGGA ACGCCGCCCA GGCCGACATG CGCACCGCCG CCGTGCTGGG CACCGAGTTC
GCCCGCGCCC GCCTGCCGTT CGAAGAGGCG GCCGGCGAGC TGCGCCTGTT CGGCTTTGCC
GGCCTGCCGA CGGCCTCGCG CGGCCGGGCC GACCACCAGT TTTTCTACGT CAACGGTCGC
TTCGTGCGCG ACCGCCTGTT GACCCACGCC GTGCGCAGCG CCTATGAAGA CGTACTGCAC
GGCGACCGCT TCCCCGCCTA CGTGCTGTGC CTGGAGCTGC CGCCCGAGGC GGTGGACGTG
AACGTGCATC CGTCCAAGAT CGAGGTGCGC TTCCGCGACA GCCGCGCAGT GCACCAGTTC
GTCTACCACG CGGTGCAGCG CGCGCTGTCG CGCCACGCCG GCGAACAGGG CGACAGCCTG
CGCACCGACA TCGCCGACGC GCCCGAGCAG CCCGGCGCCA CGGCCACGCC CGCCGACAAC
ACCACGCGCT GGGTCAACCA GATGGCCGCG CGGCAGACCT CGCTCGGCAT CGCCCAGCCG
CGCGCGGAAT ACCTGGCGAT GATGCGCGGC GGCAGCGCGC CGCAGCCGTC GAGCCGCCCG
GCATGGATGG CCGACGTGCC GAGCGCCGCC ACCCTGTTCG ATGGCGCGGC CTCCGCACCC
GCCGACGCGG CCCCGGCTCA GGCATCCGAG CCGGCAGCGG CGCCGCAAGC CGATGACAGC
GACGACGCGC ACCCGCTCGG CTTCGCCGTC GCCCAGCTGC ACGGCATCTA CGTGCTGGCG
CAGAACGCGC GCGGCATGGT GCTGGTCGAC ATGCACGCCG CGCACGAGCG CATCCTGTAC
GAACAGCTGA AAACGGCGCT GGAAGCCAGG CGCATCGAAG TGCAGCCGCT GCTGATCCCG
GTCACCTTTG CGGCCAGTCC GGTGGAGATC GGCACGGCGG AGGAATTCGG CGACACGCTG
GACCTGCTCG GCTTCGACAT CAGCGCCGTC TCGCCGACCA CGCTGGCGGT GCGCGCCGTG
CCCACGCTGC TGCAGAAGGC CGATGCCCAG GCGCTCGCCC GCGACGTGCT GCGCGACCTG
CAAGCCTACG GCGGCTCGCG CGTGCTGGCC GAGCGCCAGA ACGAGCTGCT CGCCACGCTG
GCCTGCCATT CCGCCGTGCG CGCCAACCGC CGGCTGAACC TGGACGAAAT GAACGCCCTG
CTGCGCCAGA TGGAAGCCAC CGAACGCGCC GACCAGTGCA ACCACGGCCG GCCGACGTGG
ATCCAGCTGA CGGTCGCCGA TCTGGACCGG CTGTTCCTGC GCGGCCAGTG A
 
Protein sequence
MTAATPARRP IRPLPDQLIS QIAAGEVVER PASVVKELLE NALDAGATQL QIKLEEGGVR 
RIAITDNGGG IPVDELPVAL MRHATSKIGS LEELESVATL GFRGEALASI ASVAELTLTS
RTAQDAHATQ IIAQTGRVQP ASGGVGTTVD VQHLYFNTPA RRKFLKTEQT ELGHCLEVIR
RTALARPDVA ISVHHNGKPL EHWNAAQADM RTAAVLGTEF ARARLPFEEA AGELRLFGFA
GLPTASRGRA DHQFFYVNGR FVRDRLLTHA VRSAYEDVLH GDRFPAYVLC LELPPEAVDV
NVHPSKIEVR FRDSRAVHQF VYHAVQRALS RHAGEQGDSL RTDIADAPEQ PGATATPADN
TTRWVNQMAA RQTSLGIAQP RAEYLAMMRG GSAPQPSSRP AWMADVPSAA TLFDGAASAP
ADAAPAQASE PAAAPQADDS DDAHPLGFAV AQLHGIYVLA QNARGMVLVD MHAAHERILY
EQLKTALEAR RIEVQPLLIP VTFAASPVEI GTAEEFGDTL DLLGFDISAV SPTTLAVRAV
PTLLQKADAQ ALARDVLRDL QAYGGSRVLA ERQNELLATL ACHSAVRANR RLNLDEMNAL
LRQMEATERA DQCNHGRPTW IQLTVADLDR LFLRGQ