| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2557 |
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| Symbol | |
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| ID | 1221404 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 2765362 |
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| End bp | 2766915 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637238958 |
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| Product | MVIN_ECOLI homolog transmembrane protein |
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| Protein accession | NP_520678 |
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| Protein GI | 17547276 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0728] Uncharacterized membrane protein, putative virulence factor |
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| TIGRFAM ID | [TIGR01695] integral membrane protein MviN |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0307884 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAATCTGC TCAGAACCCT CGCCACGATC AGCGGCCTGA CCATGTTGTC ACGCATCACC
GGCCTGATCC GGGAAACGCT GATTGCCCGC GCCTTCGGGG CCTCGGTCTA CACCGATGCC
TTCAACGTTG CCTTCCGCAT CCCCAACCTC CTGCGCCGAC TGTCGGCCGA GGGCGCGTTC
TCGCAGGCGT TCGTGCCCAT CCTGGGCGAG TTCAAGAACC GCCAGGGCGA GGCCCAGACG
CGCGCGCTGA TCGATGCGGT GGCGACAGTG ATGACGTGGT TCCTGGTGGC GATCTCGGCG
CTGGGCGTGA TCGGCGCGCC GCTGATCGTC ACCGCGGTCG CGACCGGCTT CAAGACGCAC
GAGAGCCAGG CCTACATCTC GGCGGTGTTC ATGACGCGGG TGATGTTCCC GTACATCGGA
CTGGTGTCGC TGGTGGCGCT TGCGTCGGGC ATCCTCAACA CCTGGCGCCA GTTCGGGGTT
CCGGCCTTCA CGCCGGTGCT GCTGAATCTG TCGTTCATCG TGGCGGCCGT GTTCGTGGCG
CCGATGCTGC AGACGCCGAT CTACGCGCAG GCCTACGCGG TGATGGTGGG CGGCATCCTG
CAGTTGGCGA TCCAGGTTCC GTCGCTGCGC CGCATCGGCA TGCTGCCGCG CGTGTCGCTC
AACGTGCGCG GGGCATGGCA CCATCCCGGC GTGCGCCGCG TGCTCAAGCA GATGCTGCCG
GCCACGCTGT CGGTCTCGGT GGCGCAGCTC AGCCTCATCA TCAACACCAA CATCGCCTCG
CGCCTGCCGG CCGGTAGCGT GTCGTGGCTG AACTACGCGG ACCGCCTGAT GGAATTCCCG
ACCGCCCTGC TGGGCGTGGC GCTCGGGACC ATCCTGCTGC CGAGTCTGTC CAAGGCCAGC
GCGGAAAACC ATCGGGAAGA ATATTCCTCG CTGCTCGACT GGGGCCTGCG CCTGACCGTG
CTGCTGGCGG TGCCGTCCGC GGTGGGGCTG TTCGTCTTCG GTGCACCGTT GACGGCCACC
CTGTTCCATT ACGGCCGGTT CAACGCGCTG GACGTGGAGA TGACGCGGCA GGCCCTGGTG
TCGTACGGCA TCGGACTGAT CGGGCTGATC GTCATCAAGA TTCTGGCGCC GGGCTTTTAC
GCGCGGCAGG ACATCCGCAC GCCGGTGAAG ATCGCGCTGG TCGTGCTGGT GGTGACGCAG
CTGTCCAACA TGGTGTTCGT GCCGACGTTC GGACACGCGG GGCTGGCGCT GTCGATCAGC
TTCGGCGCGA CCATCAACGC GGCGCTGCTG TTCCTCGGAT TGCGCCGGCG CGGCTATTAC
CACCCGCTGC CCGGCTGGGG CCTGTTTCTT GCGCAGGTGA CAGCCGCCGT GCTGCTGCTC
GCGGGCGTGC TGCTCTGGTT TGCGCAGACG TTCGACTGGG TGGGCATGGG TGCCCGGCCG
CTGATGCGCG TCGCGCTGCT GGGGGCCTGC CTGATCCTGT GCGCGGTGGT GTATTTCGGT
ACACTGTGGC TCACCGGCTT GAAGTTCTCC ACCTTCAGGA AAAGGGCGAT CTGA
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| Protein sequence | MNLLRTLATI SGLTMLSRIT GLIRETLIAR AFGASVYTDA FNVAFRIPNL LRRLSAEGAF
SQAFVPILGE FKNRQGEAQT RALIDAVATV MTWFLVAISA LGVIGAPLIV TAVATGFKTH
ESQAYISAVF MTRVMFPYIG LVSLVALASG ILNTWRQFGV PAFTPVLLNL SFIVAAVFVA
PMLQTPIYAQ AYAVMVGGIL QLAIQVPSLR RIGMLPRVSL NVRGAWHHPG VRRVLKQMLP
ATLSVSVAQL SLIINTNIAS RLPAGSVSWL NYADRLMEFP TALLGVALGT ILLPSLSKAS
AENHREEYSS LLDWGLRLTV LLAVPSAVGL FVFGAPLTAT LFHYGRFNAL DVEMTRQALV
SYGIGLIGLI VIKILAPGFY ARQDIRTPVK IALVVLVVTQ LSNMVFVPTF GHAGLALSIS
FGATINAALL FLGLRRRGYY HPLPGWGLFL AQVTAAVLLL AGVLLWFAQT FDWVGMGARP
LMRVALLGAC LILCAVVYFG TLWLTGLKFS TFRKRAI
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