Gene RSc2527 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc2527 
SymbolxseA 
ID1221374 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp2734022 
End bp2735344 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content73% 
IMG OID637238928 
Productexodeoxyribonuclease VII large subunit 
Protein accessionNP_520648 
Protein GI17547246 
COG category[L] Replication, recombination and repair 
COG ID[COG1570] Exonuclease VII, large subunit 
TIGRFAM ID[TIGR00237] exodeoxyribonuclease VII, large subunit 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.258922 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0312935 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGTCCG TCTCCGAGGT CAACCGGCGC ATCGCCGGGC TGCTGGAGCG CCACTTTGCG 
CTCGGCTGGG TGCGCGGCGA GATTTCGAAC TTCACGCGCG CCGGCAGCGG GCACTGGTAT
TTCTCGCTCA AGGATGCCGG CGCGCAGATC CGCTGCGTGA TGTTCAAGGG CCGCAACCAG
TACGCCGATT TCACCCCGCG CGAGGGGGAG GCGATCGAGG TGCGCGCGCT GGTCACGCTG
TACGAGGCGC GCGGCGAGCT GCAGTTGAGC GTCGAGGCCA TCCGCCGGGC CGGCCTGGGC
AATCTGTACG AGGCCTTCCT GCGGCTCAAG GCGGCGCTGG AGGCACAGGG GCTGTTCGAC
GCGGCGCGCA AGCGTCCGCT GCCGCGCCAT CCGCATGCGA TCGGCGTGGT GACCTCGCTG
CAGGCGGCGG CATTGCGCGA TGTGCTGACC ACGCTGCATC GGCGCGCGCC GCATGTGCCG
GTGGTGGTCT ATCCCGTACC GGTGCAGGGC GCCGGCGCGG CCGAGCGGAT TGCGGCCATG
CTCGATCTCG TCAACGCGCG GGCCGAAGTC GATGTGATCA TCCTGTGCCG GGGCGGCGGC
AGCATCGAAG ACCTGTGGGC CTTCAACGAA GAGCCGGTCG CGCGCGCCGT GGCGGCCTCG
GACATTCCCA TCGTGGCCGG CGTCGGCCAT GAGACCGACG TCACCATCGT CGATTTCGTC
GCCGACGTGC GCGCGCCCAC GCCGACCGGG GCCGCCGAAC TGGTCAGCCC CGACCGCGCC
CGCATGCTGC GTGATGTGGC GGGCTGCTGG GACGCGCTGT CCGCGACGCT GCGCCGGCAG
CTGGACCGCC GCGCCCAGAC GGTCGACTGG CTGGCCCGCC GCCTGCGCAG CCCGCAGGCG
CAGATGCGCG AACGGCGCGC CGGGCTGGCG CATCTGGAAG GCCGCCTGCG CTTCGCTCTG
CATGGCCGCG TGCAGCGCGC CGAGCATGGG CAGCGCCTGC TGGCGATGCG GCTGGACGCC
GCCCGGCCGG ACATCGCGCG CGAACGCACC GCGCTGCAGG GCATCGAGGC CGCGCTGGCA
CGCGCCATGC GCGCCACGCT GGACCGTGCG CAGACCCGCC TGTCGCATCA TCAGGCCGGG
CTGGAACTGC TGGCGCCGCA GCGCACGCTG GAGCGCGGCT ACGCGGTGCT GCTCGATGCC
AAGGGGCAGG CCATCCGCGA TCCGGCCGCG CTGCATGCGC GCGCGCGCAT CGAGGCGCGG
CTGGCGCGGG GCGCGGTCGA TATCGAGATC GCCCAGGTCC AGCCCAAGCT GCCCGAGATG
TGA
 
Protein sequence
MLSVSEVNRR IAGLLERHFA LGWVRGEISN FTRAGSGHWY FSLKDAGAQI RCVMFKGRNQ 
YADFTPREGE AIEVRALVTL YEARGELQLS VEAIRRAGLG NLYEAFLRLK AALEAQGLFD
AARKRPLPRH PHAIGVVTSL QAAALRDVLT TLHRRAPHVP VVVYPVPVQG AGAAERIAAM
LDLVNARAEV DVIILCRGGG SIEDLWAFNE EPVARAVAAS DIPIVAGVGH ETDVTIVDFV
ADVRAPTPTG AAELVSPDRA RMLRDVAGCW DALSATLRRQ LDRRAQTVDW LARRLRSPQA
QMRERRAGLA HLEGRLRFAL HGRVQRAEHG QRLLAMRLDA ARPDIARERT ALQGIEAALA
RAMRATLDRA QTRLSHHQAG LELLAPQRTL ERGYAVLLDA KGQAIRDPAA LHARARIEAR
LARGAVDIEI AQVQPKLPEM