| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2514 |
|---|
| Symbol | |
|---|
| ID | 1221361 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | + |
|---|
| Start bp | 2720853 |
|---|
| End bp | 2721095 |
|---|
| Gene Length | 243 bp |
|---|
| Protein Length | 80 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637238915 |
|---|
| Product | putative signal peptide protein |
|---|
| Protein accession | NP_520635 |
|---|
| Protein GI | 17547233 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.126827 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0022772 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACCC AACGCCTCAT CCTCGCCTCG CTGATCGCCA TTGCCGCCGT TCCGGCCTTC
GCCGCCGTGC AGAAGACGGA TCCCTACACC GATGGCCAGG CCATCACCAA GGCCGACCCG
TACACCGATG GCGCACGCGC CGACAAGTCG GACCCCTACA CGGACGGCGG TCTGCGCCAG
GCGAATCCGT ACACCGACGG CCAGCGCACC GCCCCCGCCG ACAGGTTCAC CGACGGCCAG
TAA
|
|---|
| Protein sequence | MKTQRLILAS LIAIAAVPAF AAVQKTDPYT DGQAITKADP YTDGARADKS DPYTDGGLRQ
ANPYTDGQRT APADRFTDGQ
|
|---|
| |