| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2505 |
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| Symbol | |
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| ID | 1221352 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 2711629 |
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| End bp | 2713101 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 637238906 |
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| Product | putative transcription regulator protein |
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| Protein accession | NP_520626 |
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| Protein GI | 17547224 |
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| COG category | [F] Nucleotide transport and metabolism
[L] Replication, recombination and repair |
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| COG ID | [COG0122] 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[COG2169] Adenosine deaminase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0201165 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACCTCG ACCCCGACGC CTGCTACCAC GCCGTGCAAT CGCGCGACCG GCGCTTCGAT
GGCTGGTTCT TCGTCGGCGT CACCTCCACC GGCGTCTATT GCCGCCCGAT CTGCGCGGTG
CGCACGCCGC TGCAGAAGAA CTGCCGCTTC TTCGCCTCCG CCGCCGCGGC CGAGAAGGCG
GGTTTCCGCC CGTGCCTGCG CTGCCGCCCC GAGCTGGCGC CGGGCCACAG CCTGGCCGAG
ATGTCATCCA GCCTCGCCCG CGCCGCCGCG CGCATGATCG ACGAAGGCTT CCTGCAGCAG
CACGATCTGG CCGCGCTGGC GGCAGCGGTG GGCGTGACGG ATCGCCACCT GCGCCGCATC
TTCCGCGCCG AATTCGACGT CTCGCCCATC GAGTACGCGC AGACGCAGCG CCTGCTGCTC
GCCAAGCGGC TGCTGACGGA CACCGCCATG CCGGTCGGCG ACGTCGCATA TGCGGCCGGC
TTCGGCAGCG TGCGGCGGCT CAACAGCGGG TTCGCCGAGC ACTACGGCTT CGCGCCGACA
CGGCTGCGCA CCCGCGCCGC ACCGGTATCG CGCGGCGACG ACGGCGCCAC GCTGATGCTG
GGTTACCGCC CGCCCTTCGC CTGGCACGCG CTGCTCGACT TCCTGCGCGC GCGTGCCGTG
GACGGCGTCG AGGTGGTCGA CGCGCACAGC TACGCCCGCA CCATCGCGCT CGACTATGCC
GGGCGCCGTC ATGCCGGCTG GCTGCGCGCG CGCGACGTGC CGCAACGGCA TGCGATCGCA
CTCACGCTGT CGGCCAGCCT GGTGCAGGCG ATGCCGCCGG TCCTGGCCCG CGTGCGCCGC
CTGTTCGATC TCGATTGCCG GCCCGACCTG GTCGACACGC ACCTCGGCAC GCTTGCCGCC
GGCACGCCCG GCCTGCGCGT GCCGGGGGCG GTGGACGGCT TCGAGATCGC CGTGCGCGCC
ATCGCCGGGC AGGTCGTTTC GCTGGCGCGG GCGCGGCGCA TCCTGGCCCG CCTGGCGGCT
GCCTATGGCA CGCCGCTGGC GCAGCCGCGC GCCGGATTGC CGACCGCCTT CCCGTCCGCC
ACCGCGCTGG CGAGCGTGGA CCCGCAGGCG CTGTCCGGCG AAACCGGCCT GCAGGCCAGC
CGTGCCGCCG CCATGGTGGA AATCGCCCGC GCCATCGACG CCGGCCGCCT GCGCCTGGAA
CCGCTGGTGC CGCTCGCGCC CACGCTGGCG GCGCTGCAAG CGCTGTCCGG CATCGGCGAA
TGGACCGCGC AATACATCGC CATGCGCGCG CTGGGCTGGC CGAATGCGTT TCCGCTGGGC
GACTACGTGC TGCGCAAGCG CCTGGCCGAT CACGATGGCA CGCTGCCGAC ACGCCACGCC
ATGGCCACCC GGGCGGAAGA CTGGGCGCCA TGGCGCGCCT ATGCCGCCAT GCACCTGTGG
CACCGCGACG ATGCCCAGGC TCCGACCCCA TGA
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| Protein sequence | MHLDPDACYH AVQSRDRRFD GWFFVGVTST GVYCRPICAV RTPLQKNCRF FASAAAAEKA
GFRPCLRCRP ELAPGHSLAE MSSSLARAAA RMIDEGFLQQ HDLAALAAAV GVTDRHLRRI
FRAEFDVSPI EYAQTQRLLL AKRLLTDTAM PVGDVAYAAG FGSVRRLNSG FAEHYGFAPT
RLRTRAAPVS RGDDGATLML GYRPPFAWHA LLDFLRARAV DGVEVVDAHS YARTIALDYA
GRRHAGWLRA RDVPQRHAIA LTLSASLVQA MPPVLARVRR LFDLDCRPDL VDTHLGTLAA
GTPGLRVPGA VDGFEIAVRA IAGQVVSLAR ARRILARLAA AYGTPLAQPR AGLPTAFPSA
TALASVDPQA LSGETGLQAS RAAAMVEIAR AIDAGRLRLE PLVPLAPTLA ALQALSGIGE
WTAQYIAMRA LGWPNAFPLG DYVLRKRLAD HDGTLPTRHA MATRAEDWAP WRAYAAMHLW
HRDDAQAPTP
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