Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2503 |
Symbol | |
ID | 1221350 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 2709841 |
End bp | 2710728 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637238904 |
Product | hypothetical protein |
Protein accession | NP_520624 |
Protein GI | 17547222 |
COG category | [R] General function prediction only |
COG ID | [COG2321] Predicted metalloprotease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0194422 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGTTGGG ATGACATGCG CGAAAGCGAG AACGTCGAGG ATGATCGCGC ATCCTCGAGT GGCGGCGGCT TCGGCGGCGG CGGGATGCGC CTGGGCGTGG GCGGTATCGC GCTGGTGGCG GTGGTCGGCC TGCTGATGGG CAAGAACCCG CTGGAAATCC TCGGCATGGT GATGCAGGTG TCGCAGAACG CGCCCGTGCA GAGTGCACCG CATGGCGCCG CGCGGCCCAC CGGCGAGACC GACAACGACC ACAGCAAATC GATGGTGAGC CACGTGCTGG GCGACACCGA AGACACCTGG TCGCAACTCT TCAAGCAGGC CGGCCGCGCC TATCAGCCGC CCAAGCTGGT GCTGTTCCGC CAGGGCATCC GCTCGGGTTG CGGCGACGCC ACTTCGGCGG TCGGCCCGTT CTACTGCCCG GCCGATACCA AGGTCTACCT GGATCTCGGC TTCTTCGACG AACTGCGCCG CCGCTTCGGC GCGCCGGGCG ACTTCGCGGC CGCCTACGTG GTCGCGCACG AGGTCGGCCA CCATGTGCAG AATCTGCTCG GCGTCTCGGA GAAGGTCAGC CGCGCGCAGG CCGGCCAGTC GCAACGCGTG TCGAACGCGC TGTCGGTCAA GCTGGAACTG CAGGCCGACT GCCTGGCCGG CGTGTGGGGC CACTACGCGC AGCAGCGCGG CCTGCTCGAG CGCGGCGACC TGGAACAGGC CCTCACCGCC GCGCACGCCA TCGGCGACGA TACCCTGCAG CGCAACGCCG GCCGCAGCGT CGCGCCCGAT GCGTTCACGC ACGGCACCTC GGAACAGCGC ATGCACTGGT TCCGCCAGGG CTTCGACGGC GGCGATATCC GGCAGTGCGA CACCTTCCGC GCCGGGGCCG ATGCCTGA
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Protein sequence | MRWDDMRESE NVEDDRASSS GGGFGGGGMR LGVGGIALVA VVGLLMGKNP LEILGMVMQV SQNAPVQSAP HGAARPTGET DNDHSKSMVS HVLGDTEDTW SQLFKQAGRA YQPPKLVLFR QGIRSGCGDA TSAVGPFYCP ADTKVYLDLG FFDELRRRFG APGDFAAAYV VAHEVGHHVQ NLLGVSEKVS RAQAGQSQRV SNALSVKLEL QADCLAGVWG HYAQQRGLLE RGDLEQALTA AHAIGDDTLQ RNAGRSVAPD AFTHGTSEQR MHWFRQGFDG GDIRQCDTFR AGADA
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