Gene RSc2503 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc2503 
Symbol 
ID1221350 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp2709841 
End bp2710728 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content70% 
IMG OID637238904 
Producthypothetical protein 
Protein accessionNP_520624 
Protein GI17547222 
COG category[R] General function prediction only 
COG ID[COG2321] Predicted metalloprotease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0194422 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGTTGGG ATGACATGCG CGAAAGCGAG AACGTCGAGG ATGATCGCGC ATCCTCGAGT 
GGCGGCGGCT TCGGCGGCGG CGGGATGCGC CTGGGCGTGG GCGGTATCGC GCTGGTGGCG
GTGGTCGGCC TGCTGATGGG CAAGAACCCG CTGGAAATCC TCGGCATGGT GATGCAGGTG
TCGCAGAACG CGCCCGTGCA GAGTGCACCG CATGGCGCCG CGCGGCCCAC CGGCGAGACC
GACAACGACC ACAGCAAATC GATGGTGAGC CACGTGCTGG GCGACACCGA AGACACCTGG
TCGCAACTCT TCAAGCAGGC CGGCCGCGCC TATCAGCCGC CCAAGCTGGT GCTGTTCCGC
CAGGGCATCC GCTCGGGTTG CGGCGACGCC ACTTCGGCGG TCGGCCCGTT CTACTGCCCG
GCCGATACCA AGGTCTACCT GGATCTCGGC TTCTTCGACG AACTGCGCCG CCGCTTCGGC
GCGCCGGGCG ACTTCGCGGC CGCCTACGTG GTCGCGCACG AGGTCGGCCA CCATGTGCAG
AATCTGCTCG GCGTCTCGGA GAAGGTCAGC CGCGCGCAGG CCGGCCAGTC GCAACGCGTG
TCGAACGCGC TGTCGGTCAA GCTGGAACTG CAGGCCGACT GCCTGGCCGG CGTGTGGGGC
CACTACGCGC AGCAGCGCGG CCTGCTCGAG CGCGGCGACC TGGAACAGGC CCTCACCGCC
GCGCACGCCA TCGGCGACGA TACCCTGCAG CGCAACGCCG GCCGCAGCGT CGCGCCCGAT
GCGTTCACGC ACGGCACCTC GGAACAGCGC ATGCACTGGT TCCGCCAGGG CTTCGACGGC
GGCGATATCC GGCAGTGCGA CACCTTCCGC GCCGGGGCCG ATGCCTGA
 
Protein sequence
MRWDDMRESE NVEDDRASSS GGGFGGGGMR LGVGGIALVA VVGLLMGKNP LEILGMVMQV 
SQNAPVQSAP HGAARPTGET DNDHSKSMVS HVLGDTEDTW SQLFKQAGRA YQPPKLVLFR
QGIRSGCGDA TSAVGPFYCP ADTKVYLDLG FFDELRRRFG APGDFAAAYV VAHEVGHHVQ
NLLGVSEKVS RAQAGQSQRV SNALSVKLEL QADCLAGVWG HYAQQRGLLE RGDLEQALTA
AHAIGDDTLQ RNAGRSVAPD AFTHGTSEQR MHWFRQGFDG GDIRQCDTFR AGADA