Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2497 |
Symbol | |
ID | 1221344 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 2703150 |
End bp | 2704115 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637238898 |
Product | transcription regulator protein |
Protein accession | NP_520618 |
Protein GI | 17547216 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.82783 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.625013 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCTGC GCCAGATCGA AGTGTTCCGC GCCGTGATGC TGGTCGGCAC CGTCAGCGAG GCGGCCCGCA TGCTGGCCGT GTCGCAGCCG GTGGTGACGC GCGTGCTGCA GCACACCGAG CTGCAGCTCG GCTTCCGCCT GTTCGACCGC ACCAAGGGCC GGCTGCAGCC GACCGCCGAG GCCTTCGAGC TGTTCACCGA GGTCGAGCGG CTGTACCAGG AGGTCGAGCG CGTGCGGCGC GTCTCGGCCA ACCTGCGCCA CAAGGGCGCG GGGCGGCTGC GCGTGGCGGC CACGCCCAGC CTGGCGCCGA GCATCCTCGC GCCGGCGGTG CGGCATTTCT CGCAGCGCCA TCCCGATACC CAGGTGCGCG TGTTCACGCA CCACACCGCC GAGATCGTGC AGGGGCTGCT GTCGCAGGAC ATCGACGTCG GCTTCGCCTT CGCGCCGCCG GTGCATCCGG CCATTGGCAC CACGCCGGTG GCGCAGGGGC GCATCCTGCT GGCCGCGCCG CGCGCCTGGG TCGATGCGGG GGCCGATGGG CCGGCGCTGC ATCGCATGGT CGCCGAACGG CCCTTCATTG CGCTGGAAGA CCAGATGTCG ATCGGCTCGC TGGTCGGCCA GACGCTGGCG CGCAGCGGTC TCGCGCCCCG GTCGACGCTG GAGGTGCAGA CGTATTCGCT GGCTCGTTCG CTGGTGGAAG AGGCGCTGGG CGTGACGATG CTGGATCAGT TCACGGCCGC CACTGGCAGC ATGGACCGCA TCGCCCTGTT TGCGCTGGAG CCCGCGCAGA CCTTCGAGGT CCGCGCCATG CGCGCTGAGC ATCACGCGCC GTCGTCGCTG GCCGACAGCC TGGTGGCGTG CTTCGCGCAG GCCGCCCGCG CGCTCTCCGA CGCACTGCCC GAGCGGCTGG GGCCGGTGTC CTTCGTGCTG TCGCCCGACG GTGACGCCGG CGACGCGCCC GGCTAA
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Protein sequence | MRLRQIEVFR AVMLVGTVSE AARMLAVSQP VVTRVLQHTE LQLGFRLFDR TKGRLQPTAE AFELFTEVER LYQEVERVRR VSANLRHKGA GRLRVAATPS LAPSILAPAV RHFSQRHPDT QVRVFTHHTA EIVQGLLSQD IDVGFAFAPP VHPAIGTTPV AQGRILLAAP RAWVDAGADG PALHRMVAER PFIALEDQMS IGSLVGQTLA RSGLAPRSTL EVQTYSLARS LVEEALGVTM LDQFTAATGS MDRIALFALE PAQTFEVRAM RAEHHAPSSL ADSLVACFAQ AARALSDALP ERLGPVSFVL SPDGDAGDAP G
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