Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2483 |
Symbol | |
ID | 1221330 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 2689399 |
End bp | 2691945 |
Gene Length | 2547 bp |
Protein Length | 848 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637238884 |
Product | hypothetical protein |
Protein accession | NP_520604 |
Protein GI | 17547202 |
COG category | [S] Function unknown |
COG ID | [COG4643] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGGCC CAATTCCGTT TGAACAGCAG TTCGCCGCCG CCCTGGTCGA ACACGGCTTG CAGCCTGGCG AGATCGTGGC CGATGGCAAG CTGCACCGCT TCGACGGCCC CGACGAGAAG CGCGGCAAGG GCTCTGCCTG GTACGTGCTG CATGGCGACG GCTTGCCGGC CGGCAGCTTT GGCGACTGGC GCACCGGCTT GTCCGAAACG TGGTGCGCCA AGTCCGATCG CACCATGACC GACGCCGAGC GCCAGGCGCA CCGCCAGCGT ATCGAGCAGG CTAAGGCTGA AGCAGTTGCC GAGCGCGCCA AGCTGGCGGA GGAAGCCGCC GCAAAGTGCG CGGAGCTGTG GAGTATTGCC GCGAACGTTG ACGGCGGACA CGCCTACATC GAGCGCAAGG GCGTCAAGCC GGCCGGTGCG AAGCAGTTGC GCGATGCGCT GCTGATCCCG CTGCGGGATG CCGGCGGCGA ACTGCGCAGC CTGCAGTTCA TCCAGCCGGA CGGCTCTAAG CGCTTCAAGA CGGGCGGCAC GGTGGCGGGT TGCTACTGCG CCCTGGGCGG CAAGCCCGGC CCGGATGCTC CGCTGCTGAT CTGCGAGGGC TGGGCCACGG CGTGCAGCCT GCATCAGGCG ACCGGCTACC CGGTGGCTGC CGCGATGAAC GCCGGCAACC TGCTGGCGGT GGCGCAGGCC CTGCGGGCCA AGCTGCCCGA CGCGTCGATG ATCGTCTGCG CCGACGACGA CATTGAGACG GCGGGCAATC CGGGGTTGAC CAAGGCGCGG GAAGCAGCCC AGGCCATCGG CGCACTGCTG GCGGTACCGG ATTTCGGGCC GGAGCGCCCG GACGGCGCCA CCGACTTCAA TGACCTGGCC GTGGCGTGCG GTCACGGTGC TGTCCTGGAT TGCATTGAGG CCGTTCGGAG CGGAAAAGCC GCCGACGATG GGGCAGACGA AATCACGGTG GCAGAAACCG ACGAGCAGGC CGTCGAGCGT CTGGCTTCCC TGAGCCCGAT GCAATACGAC CGTGTGCGCA AGGCCGAGGC CAAACGCATG GGCGTGCAGT TCGGCACGCT TGACCGGATG GTGAAGGACG CACGCGGCGA GGCAGCGAGC GAGGAGGCGG CTCCGTTCGA GGATGTGGAG CCGTGGCCCG AGCCGGTGGA CGGCGCGGAG CTGCTGAGCG AGATCGCCCG CTCTATCCGG CGCTTCATCA TCTGCGACCC GGAGACCATC GCAGCGACGG CGCTATGGTG CGTCGCATCT TGGCTGGCGG ATTCCGTCAA CGTCTGCCCG ATCTTGCTCA TCAACGCTCC CGAAAAGGCC TGCGGTAAGA CGCAACTGCT GACGGTGACC GGAAAGCTAG TGCCACGGCC AGCTCAGGCG GCGGGCATTT CGCCATCGGT GCTGTTCCGC ATGATCGAGA AGTACAAGCC AACGCTGCTG GTGGACGAGA TTGAAACAGT GCTGACCAAG GAGGCGGAAG ACCTGCGCGG GCTGATGAAC GCCGGCCACA CCCGCGATTC CGCGTTCGTC TGGCGCAGTG TCGCCGTGGG TGATGACTTC GAGCCCAAGC GGTTCAGTGT GTTCGGGTTC AAGGCCGTGG CCGGCATCAA CGCCGACAAG TTGGCCGAGA CGATCACCAG CCGCGCTGTG GTGGCGCAGA TGCGTCGCAA GATGCCGCAC GAGACGGCGG AGCGCCTGCG ACACGCCGAG CCCGATCTGT TCGACACGCT GTGCGCGAAG CTGGCGCGCT GGGCCGACGA CAACGGCGAC GCGATCCGCG TTGCCCGTCC GAACCTGCCT GATGCGCTGG GGGATCGGGA TCAGGACAAC TGGGAGCCGC TGCTCGCCGT AGCCGATCTG GCGGGCGGTA CATGGCCGGA CTACGCACGC GGCGCGGCGC TCAAGCTGTG CAATCGAGGC GGCGAGGCTG CGCAGAGTAC CGGGGCTGAG CTGCTGGCAG ACATTCAGGC CGTGTTCGAC CGAAAGGGGA TGCAGCGCAT CTCCATGGCC GATCTGCTGG CCGCGCTCTG CGAGGACGAC GAAGCGCCCT GGAAGACGTG GAATCGTGGC AAGGAGATGA CGACCCGCCA GTTGGGCAAG AAGCTGGGCG AGTACGGCAT CAAGAGCAAG GTCGTGCGGA TCGGGTATGA CGCACCGAAA GGCTTCGACG TTGACCAGTT CAGCGATGCC TTCGCTCGGT ATTTGTCTTC GCCGGATACC CCCCTCCCGC CGGTCACTCG GTCACAACCC AATGTTCATG CGGGTTTCGA CGTGACCGAG CGAAAAACCG TTCAGTCACG TGACCGAAAT CCGGTCACAT CCACGGAGAG CGCGAGCTCA ATTCGCGCTC ACGCCGCCGA GACGGTCGAG CATGGTAAGG CCGCGGGCTC CTGTGACCGA AATTCGGTCA CACCAGATTT TTCGGTCACC AACAAATCCT TGCTGGATAA GGCTTGTGAC CGTGTGACCG ATGTGACCGA AGAAAACGGG GATAGCGAAG AGAAAGAAAT CCCCGCGACC GACGACGAGG CGGAGGCCGA CCTATGA
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Protein sequence | MNGPIPFEQQ FAAALVEHGL QPGEIVADGK LHRFDGPDEK RGKGSAWYVL HGDGLPAGSF GDWRTGLSET WCAKSDRTMT DAERQAHRQR IEQAKAEAVA ERAKLAEEAA AKCAELWSIA ANVDGGHAYI ERKGVKPAGA KQLRDALLIP LRDAGGELRS LQFIQPDGSK RFKTGGTVAG CYCALGGKPG PDAPLLICEG WATACSLHQA TGYPVAAAMN AGNLLAVAQA LRAKLPDASM IVCADDDIET AGNPGLTKAR EAAQAIGALL AVPDFGPERP DGATDFNDLA VACGHGAVLD CIEAVRSGKA ADDGADEITV AETDEQAVER LASLSPMQYD RVRKAEAKRM GVQFGTLDRM VKDARGEAAS EEAAPFEDVE PWPEPVDGAE LLSEIARSIR RFIICDPETI AATALWCVAS WLADSVNVCP ILLINAPEKA CGKTQLLTVT GKLVPRPAQA AGISPSVLFR MIEKYKPTLL VDEIETVLTK EAEDLRGLMN AGHTRDSAFV WRSVAVGDDF EPKRFSVFGF KAVAGINADK LAETITSRAV VAQMRRKMPH ETAERLRHAE PDLFDTLCAK LARWADDNGD AIRVARPNLP DALGDRDQDN WEPLLAVADL AGGTWPDYAR GAALKLCNRG GEAAQSTGAE LLADIQAVFD RKGMQRISMA DLLAALCEDD EAPWKTWNRG KEMTTRQLGK KLGEYGIKSK VVRIGYDAPK GFDVDQFSDA FARYLSSPDT PLPPVTRSQP NVHAGFDVTE RKTVQSRDRN PVTSTESASS IRAHAAETVE HGKAAGSCDR NSVTPDFSVT NKSLLDKACD RVTDVTEENG DSEEKEIPAT DDEAEADL
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