Gene RSc2460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc2460 
Symbol 
ID1221307 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp2668756 
End bp2669313 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content71% 
IMG OID637238861 
Productputative transmembrane protein 
Protein accessionNP_520581 
Protein GI17547179 
COG category[S] Function unknown 
COG ID[COG1434] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.919961 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTGCGTG GTGTGCTGGC GGCGATCGGC CTGGGTGCCG TCGTCGCGCT GGTGGTGGGC 
GTCGTGCTGG TGCGCGGGTC CAGAACGTGG CTGCGGGAGG AATCGGTCCC CGGCCGCGCG
GATGTGATCG TCGTGCTGGG CGGGGAGTCG GGCCAGCGCG TGATCGGCGC GGCCGAGCTG
TACCACGCGG GCGTGGCGCC GCGCGTGTTC GTCAGCGGCG AGGGCGACTG CCTGCTGATC
GTGCGCCGTC TGGAGATGGC GGGCGTGCCG GCGGAGCGCA TCGGTCACGA GTGCGAATCC
GGCAGCACGA TGGAGAACGC GCGGATGACG CGCCGCACGC TGGCCGGCCA GCCGCCCGTG
CGCAGCGCCG TGCTGGTCAC GAGCTGGTAT CACACCGGCC GCGCGCTCCA TGTTTTCCGC
CGGGTCTGGC CCGAGGTGGC ATGGGGCGCG CGGGGCGTCT TTCCCGGCGA TACGCTCGCC
AAGTCATTCC CGATCTACGA AAGCGGATCG ATCCTGGCGG AGTACATCAA GCGGGCGTGG
TACGCGGTGC GGTATTGA
 
Protein sequence
MVRGVLAAIG LGAVVALVVG VVLVRGSRTW LREESVPGRA DVIVVLGGES GQRVIGAAEL 
YHAGVAPRVF VSGEGDCLLI VRRLEMAGVP AERIGHECES GSTMENARMT RRTLAGQPPV
RSAVLVTSWY HTGRALHVFR RVWPEVAWGA RGVFPGDTLA KSFPIYESGS ILAEYIKRAW
YAVRY