Gene RSc2459 details

Gene Information

• Locus tag: RSc2459
• Symbol: lspA
• ID: 1221306
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ralstonia solanacearum GMI1000
• Kingdom: Bacteria
• Replicon accession: NC_003295
• Strand: +
• Start bp: 2668195
• End bp: 2668716
• Gene Length: 522 bp
• Protein Length: 173 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 637238860
• Product: lipoprotein signal peptidase
• Protein accession: NP_520580
• Protein GI: 17547178
• COG category: [M] Cell wall/membrane/envelope biogenesis; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG0597] Lipoprotein signal peptidase
• TIGRFAM ID: [TIGR00077] lipoprotein signal peptidase

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.417163
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 21
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCCACTC GCAACAACGG CAAGAGCAAG GCCGCAGGCA GCAAAAGCGG CGGCGGCCAT 
GGCGTGGGCC CCTGGCTGGG CCTGGGCGTC ATCTGGATCC TGCTGGACCA GTTGACCAAA 
ATCGCCATCC TCAAAACCTT CGCCTACGGC GAGTCGCGCC CGATCACCGG GTTCTTCAAC 
CTGGTGCTGG CCTACAACCG GGGCGCGGCA TTCTCGTTCC TGGCGGCGGC AGGCGGCTGG 
CAGCGCTGGT TCTTCACCGG CCTGGGCGTG GCCGCGGCGC TGTTCATCGT GTGGCTGCTC 
AAGCGCCACA GCGGGCAGAA GCTGTTCTGC TTTGCGCTGG CGCTGATCCT CGGCGGGGCG 
CTGGGCAACG TGATCGACCG TCTCGTCTAC GGCCACGTGG TGGACTTCCT CGACTTCCAC 
CTGCGCGGCT ACCACTGGCC CGCGTTCAAC GTCGCCGATT GCGGCATCTG CATCGGCGCG 
GTGCTGCTGA TCATCGACGA GCTGCGGCGG GTTCGCCGCT AG 

 

Protein sequence

MATRNNGKSK AAGSKSGGGH GVGPWLGLGV IWILLDQLTK IAILKTFAYG ESRPITGFFN 
LVLAYNRGAA FSFLAAAGGW QRWFFTGLGV AAALFIVWLL KRHSGQKLFC FALALILGGA 
LGNVIDRLVY GHVVDFLDFH LRGYHWPAFN VADCGICIGA VLLIIDELRR VRR