| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2439 |
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| Symbol | |
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| ID | 1221286 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 2644714 |
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| End bp | 2645850 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637238840 |
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| Product | amino-acid transmembrane ABC transporter protein |
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| Protein accession | NP_520560 |
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| Protein GI | 17547158 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.703384 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGAAA CTGCAACGGA ATTCAAAGCG CCGAAGAAGA CGCGCGCCGC GCTTCTCGGC
TTCTTCGTCC TCGCCATCTT CGCCCCGTTC CTCGTGGGCG CCGTCGGCGG GAACTACTGG
GTACGCGTGC TGGACTTCGC ACTGCTGTAC ATCATGCTGG CCCTGGGCCT GAACATCGTG
GTGGGTTTTG CCGGCCTGCT CGACCTGGGC TACATCGCGT TCTACGCGGT GGGCGCCTAC
ATGATGGCGC TGCTGGGCTC GCCGCACCTG ACCAACCAGT TCGAGTGGAT CCATCAGCTG
TTCCCGAACG GGCTGCATCT GCTGATCTGG TGGGTGATCC CGCTGGGCGC GGGGCTGGCG
GCGCTGTTCG GCATCCTGCT GGGGGCGCCG ACGCTCAAGC TGCGCGGCGA CTACCTCGCC
ATCGTGACGC TGGGCTTCGG CGAGATCATC CGCATCTTCA TGAACAACCT CGACCGCCCG
GTGAACATCA CCAACGGTCC GAAGGGCGTC AACCTGATCG AGCCGGTCAA GCTCTTCGGG
TTCGACTTCT CGAAGCGGCA TGACATCTTC GGCATCCACT TCGAGCCGGT GCACATGTAC
TACTACCTGT TCGTGCTGCT GGCGATGGGC ATCATCACGG TGTGCCTGCG CCTGCAGAAT
TCGCGGATCG GTCGTGCATG GGTTGCCATC CGCGAGGACG AGATCGCCGC CAAGGCCATG
GGCATCAACA CCCGCAACAT CAAGCTGCTG GCGTTCGCCA TGGGTGCGTC GTTCGGCGGC
GTGTCGGGGG CGATGTTCGC GTCGTTCCAG GGCTTCGTGT CGCCGGAATC GTTCGTGCTG
TGGGAGTCGA TCTACATCCT GGCCATCGTG GTGCTGGGCG GCATGGGCCA TATCCCGGGC
GTGATCCTGG GCGGCATCCT GCTGGTGGGC TTCCAGGAAC TGCTGCGCGC GCTGGCCGAG
CCGATCCAGA ACAAGCTGTT CGGCCACGTG ATCGTGGAAG CGGAAGTGCT GCGTCAGCTG
CTGTTCGGCC TGGCGATGGT GGGGGTGATG CTGTATCGCC CCGCGGGCCT GTGGCCCTCG
CCGCGCAAGG AAGACCGCCC GCAGAAGGCG CGGGTCGGTG GTTTGTCCCG CATCTGA
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| Protein sequence | MTETATEFKA PKKTRAALLG FFVLAIFAPF LVGAVGGNYW VRVLDFALLY IMLALGLNIV
VGFAGLLDLG YIAFYAVGAY MMALLGSPHL TNQFEWIHQL FPNGLHLLIW WVIPLGAGLA
ALFGILLGAP TLKLRGDYLA IVTLGFGEII RIFMNNLDRP VNITNGPKGV NLIEPVKLFG
FDFSKRHDIF GIHFEPVHMY YYLFVLLAMG IITVCLRLQN SRIGRAWVAI REDEIAAKAM
GINTRNIKLL AFAMGASFGG VSGAMFASFQ GFVSPESFVL WESIYILAIV VLGGMGHIPG
VILGGILLVG FQELLRALAE PIQNKLFGHV IVEAEVLRQL LFGLAMVGVM LYRPAGLWPS
PRKEDRPQKA RVGGLSRI
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