| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2437 |
|---|
| Symbol | |
|---|
| ID | 1221284 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | - |
|---|
| Start bp | 2643183 |
|---|
| End bp | 2643917 |
|---|
| Gene Length | 735 bp |
|---|
| Protein Length | 244 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637238838 |
|---|
| Product | amino acid ABC transporter ATP-binding protein |
|---|
| Protein accession | NP_520558 |
|---|
| Protein GI | 17547156 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.313666 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGCATG AGCGGAACAT GAAACAGACA GTACTGAAGA TCTCCGGCCT GAAGGTGGCC
TACGGCGGCA TCCAGGCGGT CAAGGGTGTC GATCTCGAAA TCGCGGACGG CGAGCTGGTG
ACGCTGATCG GCGCCAACGG CGCCGGCAAG ACCACCACCA TGAAGGCCAT CACCGGCCTG
CAGGGCTGGG CCGGCGGCGA TGTGGAGTAC ATGGGCAAGT CCATCAAGGG CGTGCCGAGC
TACAACCTGC TCAAGCAGGG TTTGGCGATG GTGCCGGAAG GCCGCGGCGT GTTCGCGCGC
ATGACCATCG TCGAGAACCT GCAGATGGGC GCCTTCACGC GCAACGACGA GTCGGGTATC
AAGGCCGATA TCGATCGCAT GTTCGGCATC TTCCCGCGCT TGAAGGAGCG GGCCAACCAG
CTGGCCGGCA CGATGTCGGG CGGCGAACAG CAGATGCTGG CCATGGCGCG CGCGCTGATG
AGCCAGCCGA AGCTGCTGCT GCTGGACGAG CCGTCGATGG GCTTGTCGCC GATCATGGTG
GAGAAGATCT TCGAGGTCGT GCGCGACATC TCGGGCCAGG GCGTGACCGT GCTGCTGGTC
GAGCAGAACG CGCGCCTGGC GTTGCAGGCG GCGCACCGCG GCTACGTGAT GGACTCCGGT
CTGATCACCA TGAGCGGCGA CGCCAAGCAG ATGCTGGACG ATCCGAAGGT GCGCGCCGCC
TATCTGGGCG AATAA
|
|---|
| Protein sequence | MEHERNMKQT VLKISGLKVA YGGIQAVKGV DLEIADGELV TLIGANGAGK TTTMKAITGL
QGWAGGDVEY MGKSIKGVPS YNLLKQGLAM VPEGRGVFAR MTIVENLQMG AFTRNDESGI
KADIDRMFGI FPRLKERANQ LAGTMSGGEQ QMLAMARALM SQPKLLLLDE PSMGLSPIMV
EKIFEVVRDI SGQGVTVLLV EQNARLALQA AHRGYVMDSG LITMSGDAKQ MLDDPKVRAA
YLGE
|
|---|
| |