Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2436 |
Symbol | |
ID | 1221283 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 2642628 |
End bp | 2643125 |
Gene Length | 498 bp |
Protein Length | 165 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637238837 |
Product | hypothetical protein |
Protein accession | NP_520557 |
Protein GI | 17547155 |
COG category | [R] General function prediction only |
COG ID | [COG0456] Acetyltransferases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.688717 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCGTGA CGCACGCAGT TCCGGCCACG GGGATCGTTT TGTCCGACGA TCCCGCGTGG CTCCCGCTGG ACCAGATCTA CCGCTTTCTC TCGCAGGAAA CGTATTGGGC CCGCGGCCTG CCACGCGCAG TGTTCGACCG ATCGATCGCC CATTCGCTGT GCCTCGCGGC CTACCGCCTG AATGACGACG GCACGCACGG CGAGCTGGCG GGCTTCGCCC GGGTCATTTC GGACCACGCA ACCTTCGCCT ACCTGTGCGA CGTCTTCGTG CTGCCCGAGT GGCGCGGCAA GGGCATCTCG CACGCGCTGA TGCGCTTGCT GCGCGAGCAC CCCGAACTGC AGGGGCTGCG CCGCACGGTG CTGGTCACCA CCGATGCCGA CGGGCTCTAC CGCAAGCACG GCTTTACCGA CGTGCCCGGT GGCAGCGGCT TCATGCAGCT GCACCGGCCC AATGCCTATC AGGCGGCGGG CGACCCGGCG CAGACCGCTT CGGCCTGA
|
Protein sequence | MAVTHAVPAT GIVLSDDPAW LPLDQIYRFL SQETYWARGL PRAVFDRSIA HSLCLAAYRL NDDGTHGELA GFARVISDHA TFAYLCDVFV LPEWRGKGIS HALMRLLREH PELQGLRRTV LVTTDADGLY RKHGFTDVPG GSGFMQLHRP NAYQAAGDPA QTASA
|
| |