Gene RSc2429 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc2429 
Symbol 
ID1221275 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp2633842 
End bp2634738 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content71% 
IMG OID637238829 
Productoxidoreductase protein 
Protein accessionNP_520550 
Protein GI17547148 
COG category[I] Lipid transport and metabolism 
COG ID[COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACGCA TCGCCTTCAT CGGCCTCGGC AACATGGGGT CGCCGATGGT CCAACATCTC 
ATCGCGGCCG GCCATGCCGT GCGCGCCTAC GTGCGCCGTC CCGAAGCCGC CGAGCACGCC
CGTGCCCTGG GCGCCGAGCC ATGCGCCTCC CCCGCCGACG CCGCGCGCGA CGCCGAAGCC
ATCTTCACCA ACGTCACCTC CACGGCCGAC GTGGAGGCTG TGCTGCTGGG GCCGGACGGC
GTCATCCACG GCGCGCCCCG TGGCAAACCC GGCGGCGCGG TATGCATCGA CCACAGCACG
ATCTCCGCGG TGGCCACGCG CCGCATTGCG GCCGAACTGG AAGCGGCCGG GCTCGACTTC
CTGGACGCCC CGGTGTCGGG CGGCACCCTG GGCGCGCAGA AGGCCACGCT GTCGATCATG
GTCGGCGGCA AGGCCGAAGT GCTCGAGCGT GCGCGCCCCC TGCTGCAGCT GCTGGGCACC
ACCATCACGC ACATCGGCGG CCACGGCGCG GGCCAGGTCG CCAAGGCATG CAACCAGATC
GTGCAGGTGA TCAACATCCA GGGCATCGCC GAGGCCATGC TGTTCGCGCG CGCCCAGGGC
ACCGATCCGT CGCGCGTGCT GGCGGCCATC GGCCCGGGCT TCGCGGGCAG CCGCATGCTG
GACATGATGG GACCGAAGAT GGCCGAGCGG AACTTCGCCG CCGGCATCGA GGCCCGCCTG
CACGACAAGG ACTTCGGCCT GGTGCGCGAC ATCGCCCGCG AGCTCGGCCT GAAAATGCCG
GCGATGGAGC TGGTGGCTTC GCAGCTCGAT GCGCTCGTCG ACAGCGGATG GGGCTACGAC
GATACGTCGT CGCTGCTGCG CGTGCTGGAA GCACAAAACG GCCGGGCGCC GTCCTGA
 
Protein sequence
MTRIAFIGLG NMGSPMVQHL IAAGHAVRAY VRRPEAAEHA RALGAEPCAS PADAARDAEA 
IFTNVTSTAD VEAVLLGPDG VIHGAPRGKP GGAVCIDHST ISAVATRRIA AELEAAGLDF
LDAPVSGGTL GAQKATLSIM VGGKAEVLER ARPLLQLLGT TITHIGGHGA GQVAKACNQI
VQVINIQGIA EAMLFARAQG TDPSRVLAAI GPGFAGSRML DMMGPKMAER NFAAGIEARL
HDKDFGLVRD IARELGLKMP AMELVASQLD ALVDSGWGYD DTSSLLRVLE AQNGRAPS