| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2412 |
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| Symbol | ilvD |
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| ID | 1221258 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 2616780 |
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| End bp | 2618453 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637238812 |
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| Product | dihydroxy-acid dehydratase |
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| Protein accession | NP_520533 |
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| Protein GI | 17547131 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGACA ACAAGCGTTC CCAGCACATC ACCCAGGGTG TGGCGCGCTC GCCCAACCGC
TCGATGTACT ACGCGCTGGG CTACAAGAAG GAAGACTTCA GCAACCCGAT GATCGGCGTA
GCCAATGGTC ATTCGACCAT CACGCCGTGC AACTCGGGCC TGCAGAAGCT GGCTGACGCG
GCCGTGGCCG CCGTCAAGGC GTCGAACGCC AATCCGCAGA TCTTCGGCAC GCCCACCATT
TCCGACGGCA TGTCGATGGG CACCGAGGGC ATGAAGTATT CGCTGATCTC GCGCGAGGTC
ATCGCCGACT GCATCGAGAC CTGCGCACAG GGCCAGTGGA TGGACGGCGT GGTCGTTATC
GGCGGCTGCG ACAAGAACAT GCCCGGCGGC ATGATCGCCC TGGCCCGCAC CAACGTGCCC
GGCATCTACG TGTACGGCGG CACCATCAAA CCGGGCAACT GGAAGGGCAA GGATCTGACC
ATCGTGTCGT CGTTCGAGGC TGTGGGCGAG TTCACCGCCG GCCGCATGAG CGAGGAAGAC
TTCGAGGGCG TGGAGCGCAA CGCCTGCCCG ACCTCGGGTT CGTGCGGCGG CATGTACACC
GCCAACACGA TGAGCTCGTC GTTCGAGGCG CTGGGCATGT CGCTGCTGTA TTCGTCGACC
ATGGCCAACC CCGATCAGGA GAAGGTCGAC AGCGCCGCCG AATCGGCCCG CGTGCTGGTC
GAGGCCGTGC GCCGCGACCT CAAGCCGCGC GACATCATCA CGCGCAAGTC CATCGAGAAC
GCCGTGGCCG TCATCATGGC CACCGGCGGC TCGACCAACG CCGTGCTGCA CTACCTGGCC
ATCGCCCACG CCGCCGGCGT GGAATGGACC ATTGACGACT TCGAGCGCGT GCGTCAGCGC
GTGCCGGTCA TCTGCAACCT GAAGCCGTCG GGCCAGTACG TGGCCACCGA CCTGCACAAG
GCCGGCGGCA TCCCGCAGGT GATGAAGATC CTCCTGAACG CTGGCCTGCT GCACGGCGAC
TGCGTCACCA TCACCGGCAA GACGCTGGCC GAAGAGCTGG CCAACGTGCC CGACCAACCG
CGCGCGGACC AGGACGTGAT CCTGCCGATC GAGCGCGCGC TCTACCAGCA GGGCCACCTC
GCCATCCTCA AGGGCAACCT GGCCGAAGAA GGCGCCGTGG CGAAGATCAC CGGCCTGAAG
AACCCGGTCA TCTCCGGCCC GGCGCGCGTA TTCGACGACG AGCAGAGCGC GATGACCGCC
ATCCTGGCCG ACCAGATCAA GGCCGGCGAC GTGCTGGTGC TGCGCTACCT GGGCCCGAAG
GGCGGCCCCG GCATGCCGGA AATGCTGGCG CCGACCTCGG CCATCATCGG CAAGGGCCTG
GGCGAATCGG TGGGCTTCGT CACCGACGGG CGCTTCTCGG GCGGCACCTG GGGCATGGTG
GTCGGCCACG TCGCGCCGGA AGCCTTCGTG GGCGGCACCA TCGCCCTGGT GCAGGAAGGT
GATTCGATCA CCATCGACGC GCACCAGCGC CTGCTGCAGC TGAACGTGCC GGAAGACGAA
CTGGCCCGCC GCCGCGCCGC GTGGAAGCAG CCGGCACCGC GCTACACGCG CGGCGTGCTC
GCCAAGTTCG CGCAGCTGAC GTCGACGGCC AGCAAGGGCG CCGTCACGGA CTGA
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| Protein sequence | MPDNKRSQHI TQGVARSPNR SMYYALGYKK EDFSNPMIGV ANGHSTITPC NSGLQKLADA
AVAAVKASNA NPQIFGTPTI SDGMSMGTEG MKYSLISREV IADCIETCAQ GQWMDGVVVI
GGCDKNMPGG MIALARTNVP GIYVYGGTIK PGNWKGKDLT IVSSFEAVGE FTAGRMSEED
FEGVERNACP TSGSCGGMYT ANTMSSSFEA LGMSLLYSST MANPDQEKVD SAAESARVLV
EAVRRDLKPR DIITRKSIEN AVAVIMATGG STNAVLHYLA IAHAAGVEWT IDDFERVRQR
VPVICNLKPS GQYVATDLHK AGGIPQVMKI LLNAGLLHGD CVTITGKTLA EELANVPDQP
RADQDVILPI ERALYQQGHL AILKGNLAEE GAVAKITGLK NPVISGPARV FDDEQSAMTA
ILADQIKAGD VLVLRYLGPK GGPGMPEMLA PTSAIIGKGL GESVGFVTDG RFSGGTWGMV
VGHVAPEAFV GGTIALVQEG DSITIDAHQR LLQLNVPEDE LARRRAAWKQ PAPRYTRGVL
AKFAQLTSTA SKGAVTD
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