Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2410 |
Symbol | lgt |
ID | 1221256 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 2614791 |
End bp | 2615702 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637238810 |
Product | prolipoprotein diacylglyceryl transferase |
Protein accession | NP_520531 |
Protein GI | 17547129 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0682] Prolipoprotein diacylglyceryltransferase |
TIGRFAM ID | [TIGR00544] prolipoprotein diacylglyceryl transferase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCATCC ATCCGCAATT CGATCCCATC GCGCTGCATC TCGGGCCGCT CGCCATCCGT TGGTACGGCC TGATGTACCT GGCCGCGTTC ATCATGTTCC TGTGGTTCGG CCGGCTGCGC ACGCGGCAGC CCCACATCGC CGCGCAAGGC TGGAGCGGCC GCGATCTGGA CGACATGCTG TTCTACGGCG TGCTCGGTGT GATCCTGGGC GGGCGCCTGG GCTATGTGCT GTTCTACAAG CCCGACTGGT ATCTCGCGCA TCCGCTGGAC ATCTTCAAGG TCTGGGAGGG CGGCATGGCC TTCCACGGTG GCTTCCTCGG CGTGGTGCTG GCGATGATGC TGTACGCGCG CATGCGCCGC CGCCCGTGGA TGCAGGTCAC CGATTTCATC GCGCCGATGG TTCCGTGCGG ACTGGCGGCC GGCCGTCTGG GCAACTTCAT CAACGGCGAG CTGTGGGGCC GCGTGTCCTC GCCCGACCTG CCGTGGGCGA TGCTGTTCCC GCAGGCGCAG GGCGAAGACC GGGCCTGGCT GGCGGCGCAC GCGCAGCAGG CGGTGACCAG CGGCGTGCAG GCCGTGTTCG ACCAGTACCA CATGCTGCCG CGCCATCCCT CGCAGATCTA CCAGTTCCTC GGCGAGGGCG TGCTGTTCTT CATCCTGCTG TGGCTGTATG CGCGCAAGCC GCGGCCGATG GGCGCCGTGT CGGGCATGTT CCTGGTCGGC TACGGCGTGT TCCGCTTTGC GGCCGAATTC GCGCGCGAGC CCGACAACTT CCTCGGCCTG CTGGCGCTGA GTCTGTCGAT GGGGCAGTGG TTGTCGCTGC CGATGATCCT GGCGGGCGTG GCGATGTTGG CGTGGGCGTA TCGGCGCGCC GGGCGCAACG GGAACGACGC GCAAGCCGGC GCACACGCTT GA
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Protein sequence | MLIHPQFDPI ALHLGPLAIR WYGLMYLAAF IMFLWFGRLR TRQPHIAAQG WSGRDLDDML FYGVLGVILG GRLGYVLFYK PDWYLAHPLD IFKVWEGGMA FHGGFLGVVL AMMLYARMRR RPWMQVTDFI APMVPCGLAA GRLGNFINGE LWGRVSSPDL PWAMLFPQAQ GEDRAWLAAH AQQAVTSGVQ AVFDQYHMLP RHPSQIYQFL GEGVLFFILL WLYARKPRPM GAVSGMFLVG YGVFRFAAEF AREPDNFLGL LALSLSMGQW LSLPMILAGV AMLAWAYRRA GRNGNDAQAG AHA
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