| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2403 |
|---|
| Symbol | |
|---|
| ID | 1221249 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | + |
|---|
| Start bp | 2610577 |
|---|
| End bp | 2611083 |
|---|
| Gene Length | 507 bp |
|---|
| Protein Length | 168 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637238803 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_520524 |
|---|
| Protein GI | 17547122 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2947] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCGCA CACCGCCAAC TCCCACGCCC GCCATCATGG CCGCCCAATA CTGGCTGATG
AAATCCGAGC CCGACGAGGC CAGCATCGAT ACGCTGCAAA CCGAGGTCAC CCTGCCGTGG
ACCGGCGTGC GCAACTACCA GGCGCGCAAC TTCATGCGCG ACCGCATGCG CATCGGCGAC
GGCGTGCTGT TCTATCACTC GTCATGCCCG CAGCCGGGCA TCGCGGGGCT GGCCGAGGTG
TGCTCCACCA GCTATCCCGA TCCAACGCAG TTCGACAGCA AGAGTCCCTA CTACGATCCC
GCAGCCAAGC AGGAGACGCC TCGCTGGATG CTGGTCGACG TCAGGTTCGT GCGCAAATGC
GCGCTGATCG ACCTGCCCAC GCTGCGCGCG CAGGAACCGC TGGCCGAGAT GACCATCCTC
CAGCGCGGCA ACCGCCTGTC GATCACGCCG GTCACGCCCG CGCAATGGCG CTACATCACC
AGCCGGCTGA TACACGACGC GGACTGA
|
|---|
| Protein sequence | MLRTPPTPTP AIMAAQYWLM KSEPDEASID TLQTEVTLPW TGVRNYQARN FMRDRMRIGD
GVLFYHSSCP QPGIAGLAEV CSTSYPDPTQ FDSKSPYYDP AAKQETPRWM LVDVRFVRKC
ALIDLPTLRA QEPLAEMTIL QRGNRLSITP VTPAQWRYIT SRLIHDAD
|
|---|
| |