| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2400 |
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| Symbol | |
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| ID | 1221246 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 2606993 |
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| End bp | 2608858 |
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| Gene Length | 1866 bp |
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| Protein Length | 621 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637238800 |
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| Product | outer membrane receptor protein |
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| Protein accession | NP_520521 |
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| Protein GI | 17547119 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | [TIGR01779] TonB-dependent vitamin B12 receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.901841 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCGCGC TTGCCGGCGC GCTGGCGGGG GTTGCGGCGG GGCCGGTCTG GGCACAGGGC
GACGTGCAGT CGGCCGGCAT GCCTGTCGGC GAACTCAACC CGACCGTGGT GACGGCGTCG
CGCAGCGAGC AGAAGCTTGC CGATGCGCTG CCGCATACCA CGGTCATCTC GCGCGCCGAC
ATCGAGCGGT CGCAGGCACC GGATGCGGTG TCGCTGCTGC GCCGCGAGGC GGGCATCGAG
ATCGCCCAGG CGGGCGGGCC GGGCGCGGCC GCGAGCCTCT TCATGCGGGG CGCCGGGTCC
AACCAGACGC TCATTCTGAT CGACGGCGTG CGCGTGAGTT CCGGCACCAC CGGCACGACG
CAGATCGAGC AGCTGATGGC CGATCAGATC GACCATATCG AGATCGTGCG CGGCAATGTC
TCCGCGCTGT ACGGCTCGGA TGCGATCGGC GGGGTGGTGC AGATCTTCAC GCGCAACGGG
CGCGGGCACG CGCCGCTGGC CAACGCGGAA ATCGAGTACG GCGCGCGCAA TACCAAGCGC
GCGCAGGCCG GCATCAGCGG CCAGCTGGAC GCGCGCGGCG ACACGTCGTT CGCGCTGTCG
GTGTCGGCGT TAAAGACGAC GGGTTTCTCG TCGATCAATC CGAAGCAGGC GCCGAACGCC
AACCCGAACG ACAACGCGTA CGCGAACAAG AGCGTGTCGG CGCAGCTGCA GCATCGCTTC
TCGTCCGACT GGCAGGCGGG GCTGACGTGG TTCCAGACCT GGAGCACCGT GAGCTACGAC
AACGCGTTCG GCGCGCCCAC CGACGACAAC GAGTCGCACA ACCAGGTGCG TGCCATGTCG
GCCTACGTGG ACGGCAAGCT GACGCCCGAC TGGAAGACGC GCCTGACGCT GTCGCAGGGC
GACGACAAGA ACCTGAATTT CACCAACGGC CAGGTGCAGG AGCCGGGGCG CTTCAACACG
CGGAACCGCC AGGCGTCGTG GCAGAACGAC TGGGCCTTCC TGCCGGACCA GATGCTGAAG
GTCGGCTTCG AGCACCTGGA CCAGACCATC GACACCGATG CCTACTCGCC GCCGACGCGC
CGTGTGGACT CGGGCTACAT CGGCTATGAA GGCAAGTTCG GCCGGCACCA GCTGCAGCTG
AATCTGCGCC GCGACCGCTA CTCCGATTTC GGCGGCGCCA GCAGCTACTA TGCCGGCTAC
GGCTTTGCCT TCAACCCGCA GTGGAAGGCG GTGGCCAGCA TCAGCAATGC GTTCCGGGCG
CCCAGCTTCA ACGAGCTGTA CTACCCGTTC TTCGGCAACC CGAACCTGCA GCCGGAGAAG
GCGCGCTCGG TGGAGGGCGG TGTGGAATAC CAGAGCACGG TCGGCCTTGT GCGCATGACG
GCATTCGAAA CCGACTACAG CAACCTGATC ACCAGCGTGT TCGACCCCGT GTCGGGCAAT
TTCCTGGCGG CCAACGTCAA CCGCGCGCGG GTGAACGGGC TGGAGACGTC CTGGCGGGGC
ACGCTCCATG GCGTGGACGT GCGCGCCAGC TTGACCATCC AGAATCCGCA GGACCTGTCG
GCGAACCGGC TGCTGGCGCG CCATGCCCGG CACTTCGGCA GCGTGTCGGC CTACAAGTCC
TTCGGGCCGT TCTCGGCCGG CCTCGAGTGG AATGCCGCCG GCGAGCGGCA GGATTCGGCG
CGTACGCTGG GCGGCTATGG CTTGCTCAAC CTGACGGGGC GTTACCAGAT CACGCATGAT
TGGGCGCTGT CGGCGCGCGT GGAGAACCTG CTCAACAAGA ACTACCAGCT GATCGCCCCA
TACAACACGG CATCGCGCGG GGTGTTCTTC ACGCTGTCGT GGCAACAGCA CGCACCGCAA
CGATGA
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| Protein sequence | MGALAGALAG VAAGPVWAQG DVQSAGMPVG ELNPTVVTAS RSEQKLADAL PHTTVISRAD
IERSQAPDAV SLLRREAGIE IAQAGGPGAA ASLFMRGAGS NQTLILIDGV RVSSGTTGTT
QIEQLMADQI DHIEIVRGNV SALYGSDAIG GVVQIFTRNG RGHAPLANAE IEYGARNTKR
AQAGISGQLD ARGDTSFALS VSALKTTGFS SINPKQAPNA NPNDNAYANK SVSAQLQHRF
SSDWQAGLTW FQTWSTVSYD NAFGAPTDDN ESHNQVRAMS AYVDGKLTPD WKTRLTLSQG
DDKNLNFTNG QVQEPGRFNT RNRQASWQND WAFLPDQMLK VGFEHLDQTI DTDAYSPPTR
RVDSGYIGYE GKFGRHQLQL NLRRDRYSDF GGASSYYAGY GFAFNPQWKA VASISNAFRA
PSFNELYYPF FGNPNLQPEK ARSVEGGVEY QSTVGLVRMT AFETDYSNLI TSVFDPVSGN
FLAANVNRAR VNGLETSWRG TLHGVDVRAS LTIQNPQDLS ANRLLARHAR HFGSVSAYKS
FGPFSAGLEW NAAGERQDSA RTLGGYGLLN LTGRYQITHD WALSARVENL LNKNYQLIAP
YNTASRGVFF TLSWQQHAPQ R
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