| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2397 |
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| Symbol | cobT |
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| ID | 1221243 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 2603895 |
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| End bp | 2604959 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 637238797 |
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| Product | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
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| Protein accession | NP_520518 |
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| Protein GI | 17547116 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2038] NaMN:DMB phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR03160] nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.115036 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACACTG ATATTTCTTC CTTCGATCCC GCGCTCGCTG CCCGCCTGCG GGCCGCCGTC
GACAGCAAGA CCAAGCCGCT CGGGGCGCTC GGCCGGCTGG AGTCGCTGGC CGTGCAGATC
GGCCTGATCC AGGACACCGA AGCGCCCGTG CTGATCCGGC CGGCCATGGT GGTGTTCGCC
GCCGACCACG GCGTCGCGCA GGCGGGCGTC AGCGCTTACC CGCAGGCGGT GACGGCGCAG
ATGGTGCTCA ACTTCATCGC CGGCGGCGCG GCGGTCAACG TGTTCTGCCG CCAGCACGGC
TTCGCGTTGG AGATCGTCAA TGCGGGCGTG GCCATGCCGC TGTGGTCGCT GGGCGTGCCC
GGCCTGATCG ATGCGCCCAT CGGCGCCGGT ACCCGCAACT TCGCGCACGA ACCGGCGATG
ACCGCGGCGG AGCGCGACCG CGCCATGGCG CTGGGCGCGC AGCGCGTGGC GGCGCACGCC
GAGCTCGGTT CCAACGTGAT CGCGCTGGGC GAGATGGGCA TCGGCAACAC GGCCTCGGCG
GCCTGCCTGA TGGCGCGGCT GTGCGATCTG CCGCTCGCGC AATGCGTCGG GCGCGGCGCC
GGCCTCGACG ATGCGGGGCT GGCCCGCAAG TGCGCGGTGC TGGAGGCCGC GCTGGCCGCG
CACGCCGATG CCCGCGCGCC GCTGGACGCG CTCGCCTGCT TCGGCGGTTT CGAGATCGCG
GCCATGGCCG GCGCGATGCT GGAAGCCGCG CGGCGCCGCA TGGTGATCCT GGTGGACGGC
TTCATCGCTT CGGCCGCGGC GCTGGTGGCC ACGCGCGTCG CCCCCGAGGT GCAGCGCTTC
TGCGTGTTCG CGCATCTGTC GGACGAGCAC GGCCATCGCG CGTTGCTGGC CGCGCTGGGC
GCCGAACCGC TGCTGCAGCT GTCGATGCGG CTGGGCGAGG GCAGCGGCGC GGTGCTGGCG
TATCCGCTGG TGGTCTCGGC GGTCGCCTTC CTGCGCGAGA TGGCGACGTT CGCCAGCGCC
GGCGTGAGCG AGCAGGCGCC GCCGGCGCTG GATCCGGCGG CATGA
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| Protein sequence | MHTDISSFDP ALAARLRAAV DSKTKPLGAL GRLESLAVQI GLIQDTEAPV LIRPAMVVFA
ADHGVAQAGV SAYPQAVTAQ MVLNFIAGGA AVNVFCRQHG FALEIVNAGV AMPLWSLGVP
GLIDAPIGAG TRNFAHEPAM TAAERDRAMA LGAQRVAAHA ELGSNVIALG EMGIGNTASA
ACLMARLCDL PLAQCVGRGA GLDDAGLARK CAVLEAALAA HADARAPLDA LACFGGFEIA
AMAGAMLEAA RRRMVILVDG FIASAAALVA TRVAPEVQRF CVFAHLSDEH GHRALLAALG
AEPLLQLSMR LGEGSGAVLA YPLVVSAVAF LREMATFASA GVSEQAPPAL DPAA
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