Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2394 |
Symbol | |
ID | 1221240 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 2601598 |
End bp | 2602539 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 637238794 |
Product | substrate-binding periplasmic (PBP) ABC transporter protein |
Protein accession | NP_520515 |
Protein GI | 17547113 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0672231 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCTC ATCTCGCCCG CTGCCTGCGC GTGCTCGGCC TGGCCGCGCT GCTGGCCATC GCCCTGCCGG TCCAGGCCGC CCTCTCCGTC ACCGACGATA CCGGTGCCAC CGTCACGCTG CCGCATCCGG CGCAGCGCGT GGTCAGCCTC GCGCCGCACG CCACCGAACT GCTGTTCGCG GCCGGCGGCG GCGCGCGCAT CGTCGGCACG GTCACCTATA GCGACTACCC AAGCGCGGCA CGCGACATCC CGCGCGTGGG CGACAACCGC GCGGTGGACC TCGAGCGCAT CGCCGCGCTC AAGCCGGACC TGGTGGTGGT CTGGCGCCAC GGCAACGCGC AGCAGCAAAC CGACCGGCTG CGCGCGCTCG GCATCCCGCT GTTCTTCTCC GAGCCGCGCC GGCTGACGGA CATCCCGCGT GCCATCGAAG CGCTCGGCAC GCTGCTCGAC ACCCGCGCCG GCGCGCACGA CGCCGCCGAA CGGTTCCGCC GGCAGGCCGA CGACCTGCGC GAACGCTACG CCGGCCGCCC GCCCGTGACG GTGTTCTTCC AGGTCTGGCA GCAGCCGCTG ATGACGCTCA ACGGCCAGCA CGTCTTCTCC GACATGCTCG CGCTGTGCGG CGGCCGCAAC GTGTTCGCCG ACGCGCAGCC GCTGGTGCCG ACGGTCTCGA CCGAGGCCGT GCTCGCGGCC AACCCGGAGG TGCTGCTGAC CGCCGGCCTG GGCGCCACCC AAGGCAACCG ACCGATCGAC ACGCTCGACG GCTGGAAGCG CTGGCCGTCC CTGCTGGCGG TGCAGCGCGG CAACCTCTTC GCCATCGACG GCGACCTGAT CACGCGGCCG GGCCCGCGCC TGCTGCAAGG CGCGGCGCTG CTGTGCGAAG GCCTGGAGCA AGCCCGCGCG CGCCGTCCGG CCCAGGGAAG CGCCGGCGCA ACCAACCGCT GA
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Protein sequence | MTAHLARCLR VLGLAALLAI ALPVQAALSV TDDTGATVTL PHPAQRVVSL APHATELLFA AGGGARIVGT VTYSDYPSAA RDIPRVGDNR AVDLERIAAL KPDLVVVWRH GNAQQQTDRL RALGIPLFFS EPRRLTDIPR AIEALGTLLD TRAGAHDAAE RFRRQADDLR ERYAGRPPVT VFFQVWQQPL MTLNGQHVFS DMLALCGGRN VFADAQPLVP TVSTEAVLAA NPEVLLTAGL GATQGNRPID TLDGWKRWPS LLAVQRGNLF AIDGDLITRP GPRLLQGAAL LCEGLEQARA RRPAQGSAGA TNR
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