Gene RSc2394 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc2394 
Symbol 
ID1221240 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp2601598 
End bp2602539 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content74% 
IMG OID637238794 
Productsubstrate-binding periplasmic (PBP) ABC transporter protein 
Protein accessionNP_520515 
Protein GI17547113 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0672231 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCTC ATCTCGCCCG CTGCCTGCGC GTGCTCGGCC TGGCCGCGCT GCTGGCCATC 
GCCCTGCCGG TCCAGGCCGC CCTCTCCGTC ACCGACGATA CCGGTGCCAC CGTCACGCTG
CCGCATCCGG CGCAGCGCGT GGTCAGCCTC GCGCCGCACG CCACCGAACT GCTGTTCGCG
GCCGGCGGCG GCGCGCGCAT CGTCGGCACG GTCACCTATA GCGACTACCC AAGCGCGGCA
CGCGACATCC CGCGCGTGGG CGACAACCGC GCGGTGGACC TCGAGCGCAT CGCCGCGCTC
AAGCCGGACC TGGTGGTGGT CTGGCGCCAC GGCAACGCGC AGCAGCAAAC CGACCGGCTG
CGCGCGCTCG GCATCCCGCT GTTCTTCTCC GAGCCGCGCC GGCTGACGGA CATCCCGCGT
GCCATCGAAG CGCTCGGCAC GCTGCTCGAC ACCCGCGCCG GCGCGCACGA CGCCGCCGAA
CGGTTCCGCC GGCAGGCCGA CGACCTGCGC GAACGCTACG CCGGCCGCCC GCCCGTGACG
GTGTTCTTCC AGGTCTGGCA GCAGCCGCTG ATGACGCTCA ACGGCCAGCA CGTCTTCTCC
GACATGCTCG CGCTGTGCGG CGGCCGCAAC GTGTTCGCCG ACGCGCAGCC GCTGGTGCCG
ACGGTCTCGA CCGAGGCCGT GCTCGCGGCC AACCCGGAGG TGCTGCTGAC CGCCGGCCTG
GGCGCCACCC AAGGCAACCG ACCGATCGAC ACGCTCGACG GCTGGAAGCG CTGGCCGTCC
CTGCTGGCGG TGCAGCGCGG CAACCTCTTC GCCATCGACG GCGACCTGAT CACGCGGCCG
GGCCCGCGCC TGCTGCAAGG CGCGGCGCTG CTGTGCGAAG GCCTGGAGCA AGCCCGCGCG
CGCCGTCCGG CCCAGGGAAG CGCCGGCGCA ACCAACCGCT GA
 
Protein sequence
MTAHLARCLR VLGLAALLAI ALPVQAALSV TDDTGATVTL PHPAQRVVSL APHATELLFA 
AGGGARIVGT VTYSDYPSAA RDIPRVGDNR AVDLERIAAL KPDLVVVWRH GNAQQQTDRL
RALGIPLFFS EPRRLTDIPR AIEALGTLLD TRAGAHDAAE RFRRQADDLR ERYAGRPPVT
VFFQVWQQPL MTLNGQHVFS DMLALCGGRN VFADAQPLVP TVSTEAVLAA NPEVLLTAGL
GATQGNRPID TLDGWKRWPS LLAVQRGNLF AIDGDLITRP GPRLLQGAAL LCEGLEQARA
RRPAQGSAGA TNR